Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VSX2P58304 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VSX2P58304 RNU6-809P-201ENST00000384461 107 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AL133475.1-201ENST00000404414 305 ntBASIC1.9□□□□□ -2.11
VSX2P58304 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.9□□□□□ -2.11
VSX2P58304 CYCSP48-201ENST00000417124 323 ntBASIC1.9□□□□□ -2.11
VSX2P58304 RAC1P6-201ENST00000423911 575 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
VSX2P58304 RPL37P21-201ENST00000435890 276 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.9□□□□□ -2.11
VSX2P58304 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
VSX2P58304 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.9□□□□□ -2.11
VSX2P58304 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 AC011005.2-201ENST00000487324 359 ntBASIC1.9□□□□□ -2.11
VSX2P58304 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 MRPS36P5-201ENST00000551909 298 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.9□□□□□ -2.11
VSX2P58304 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.9□□□□□ -2.11
VSX2P58304 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
VSX2P58304 BNIP3P9-201ENST00000603714 553 ntBASIC1.9□□□□□ -2.11
VSX2P58304 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC009314.1-201ENST00000603871 304 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC144521.1-201ENST00000607148 956 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AL449363.1-201ENST00000617815 186 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
VSX2P58304 AC241585.2-209ENST00000638217 143 ntBASIC1.9□□□□□ -2.11
VSX2P58304 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
VSX2P58304 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.89□□□□□ -2.11
VSX2P58304 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VSX2P58304 HSPE1P11-201ENST00000339579 310 ntBASIC1.89□□□□□ -2.11
VSX2P58304 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VSX2P58304 RNU6-1214P-201ENST00000363650 109 ntBASIC1.89□□□□□ -2.11
VSX2P58304 RNU5E-6P-201ENST00000365574 115 ntBASIC1.89□□□□□ -2.11
VSX2P58304 RNU6-19P-201ENST00000384718 107 ntBASIC1.89□□□□□ -2.11
VSX2P58304 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VSX2P58304 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VSX2P58304 AL354941.1-201ENST00000438600 464 ntBASIC1.89□□□□□ -2.11
VSX2P58304 BRK1P2-201ENST00000442875 223 ntBASIC1.89□□□□□ -2.11
VSX2P58304 PSPHP1-201ENST00000450062 261 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.89□□□□□ -2.11
VSX2P58304 AC072039.1-201ENST00000477611 581 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VSX2P58304 FAM92A1P2-202ENST00000504766 877 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VSX2P58304 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.89□□□□□ -2.11
VSX2P58304 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
VSX2P58304 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
VSX2P58304 SNORD19.2-201ENST00000516978 73 ntBASIC1.89□□□□□ -2.11
VSX2P58304 RNU6-201P-201ENST00000517100 61 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.89□□□□□ -2.11
VSX2P58304 AP001372.4-201ENST00000524889 472 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC084851.1-201ENST00000529105 249 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.89□□□□□ -2.11
VSX2P58304 ZNF519P3-201ENST00000557158 1032 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC015712.3-201ENST00000559380 164 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
VSX2P58304 AC025678.1-201ENST00000567861 338 ntBASIC1.89□□□□□ -2.11
VSX2P58304 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AP001004.1-201ENST00000582468 324 ntBASIC1.89□□□□□ -2.11
VSX2P58304 MIR4765-201ENST00000585007 77 ntBASIC1.89□□□□□ -2.11
VSX2P58304 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.89□□□□□ -2.11
VSX2P58304 AP000811.1-201ENST00000603803 651 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC112187.2-201ENST00000604345 283 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC025588.2-201ENST00000604851 466 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AL355816.2-201ENST00000610049 647 ntBASIC1.89□□□□□ -2.11
VSX2P58304 TUSC7.1-201ENST00000610969 165 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AC011939.3-201ENST00000613686 466 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AL050303.3-201ENST00000613704 284 ntBASIC1.89□□□□□ -2.11
VSX2P58304 uc_338.12-201ENST00000616344 181 ntBASIC1.89□□□□□ -2.11
VSX2P58304 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VSX2P58304 AC104010.1-201ENST00000616889 150 ntBASIC1.89□□□□□ -2.11
VSX2P58304 AP002782.1-201ENST00000623107 614 ntBASIC1.89□□□□□ -2.11
VSX2P58304 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VSX2P58304 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VSX2P58304 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VSX2P58304 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VSX2P58304 Y_RNA.18-201ENST00000362461 102 ntBASIC1.88□□□□□ -2.11
VSX2P58304 RNU6-898P-201ENST00000365627 104 ntBASIC1.88□□□□□ -2.11
VSX2P58304 Y_RNA.534-201ENST00000384599 112 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 AL353777.1-201ENST00000425552 326 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.88□□□□□ -2.11
VSX2P58304 RPS15AP9-201ENST00000439856 381 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC118469.1-201ENST00000442943 488 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AL606517.1-201ENST00000446914 387 ntBASIC1.88□□□□□ -2.11
VSX2P58304 Z73417.1-201ENST00000447373 778 ntBASIC1.88□□□□□ -2.11
VSX2P58304 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC068781.1-201ENST00000488231 618 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AF131216.2-201ENST00000512316 564 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms