Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
BDNFP23560 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.93□□□□□ -1.94
BDNFP23560 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BDNFP23560 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BDNFP23560 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BDNFP23560 RNU6-1010P-201ENST00000362757 107 ntBASIC2.92□□□□□ -1.94
BDNFP23560 RNU6-72P-201ENST00000384285 79 ntBASIC2.92□□□□□ -1.94
BDNFP23560 RNU6-843P-201ENST00000384454 104 ntBASIC2.92□□□□□ -1.94
BDNFP23560 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
BDNFP23560 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.92□□□□□ -1.94
BDNFP23560 RNU2-52P-201ENST00000410680 190 ntBASIC2.92□□□□□ -1.94
BDNFP23560 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
BDNFP23560 AC108938.1-201ENST00000451204 136 ntBASIC2.92□□□□□ -1.94
BDNFP23560 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 SNORA25.11-201ENST00000515935 105 ntBASIC2.92□□□□□ -1.94
BDNFP23560 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.92□□□□□ -1.94
BDNFP23560 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.92□□□□□ -1.94
BDNFP23560 AC136619.2-201ENST00000563361 631 ntBASIC2.92□□□□□ -1.94
BDNFP23560 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 AC137800.2-201ENST00000574375 120 ntBASIC2.92□□□□□ -1.94
BDNFP23560 BNIP3P30-201ENST00000601184 574 ntBASIC2.92□□□□□ -1.94
BDNFP23560 AC073410.2-201ENST00000603240 332 ntBASIC2.92□□□□□ -1.94
BDNFP23560 AL670379.4-201ENST00000605279 254 ntBASIC2.92□□□□□ -1.94
BDNFP23560 AC010338.1-201ENST00000621823 717 ntBASIC2.92□□□□□ -1.94
BDNFP23560 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.92□□□□□ -1.94
BDNFP23560 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BDNFP23560 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
BDNFP23560 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
BDNFP23560 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BDNFP23560 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
BDNFP23560 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BDNFP23560 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
BDNFP23560 SNORD14B-201ENST00000364533 90 ntBASIC2.91□□□□□ -1.94
BDNFP23560 RNU1-91P-201ENST00000364746 163 ntBASIC2.91□□□□□ -1.94
BDNFP23560 RNU6-61P-201ENST00000365528 109 ntBASIC2.91□□□□□ -1.94
BDNFP23560 RNU1-57P-201ENST00000384491 166 ntBASIC2.91□□□□□ -1.94
BDNFP23560 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
BDNFP23560 SNORA40.3-201ENST00000390964 122 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AL360182.1-201ENST00000397433 468 ntBASIC2.91□□□□□ -1.94
BDNFP23560 RNA5SP270-201ENST00000411361 118 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC107081.1-201ENST00000414975 361 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AL451074.5-201ENST00000415894 435 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.91□□□□□ -1.94
BDNFP23560 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.91□□□□□ -1.94
BDNFP23560 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.91□□□□□ -1.94
BDNFP23560 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
BDNFP23560 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.91□□□□□ -1.94
BDNFP23560 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.91□□□□□ -1.94
BDNFP23560 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
BDNFP23560 RNA5SP269-201ENST00000459032 137 ntBASIC2.91□□□□□ -1.94
BDNFP23560 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC003982.1-202ENST00000469928 248 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC140059.1-201ENST00000489238 361 ntBASIC2.91□□□□□ -1.94
BDNFP23560 SNORA31.15-201ENST00000516771 132 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC145350.1-201ENST00000567426 208 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.91□□□□□ -1.94
BDNFP23560 MIR548AB-201ENST00000584917 84 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC006023.1-201ENST00000603944 259 ntBASIC2.91□□□□□ -1.94
BDNFP23560 SNORD14A-201ENST00000606526 91 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC107871.2-201ENST00000612894 502 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AL161423.1-201ENST00000613700 262 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.91□□□□□ -1.94
BDNFP23560 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BDNFP23560 AC091931.1-201ENST00000623488 728 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AP000770.2-201ENST00000623694 100 ntBASIC2.91□□□□□ -1.94
BDNFP23560 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.91□□□□□ -1.94
BDNFP23560 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
BDNFP23560 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
BDNFP23560 CKAP2P1-201ENST00000555477 2049 ntBASIC2.9□□□□□ -1.94
BDNFP23560 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BDNFP23560 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BDNFP23560 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BDNFP23560 AC062016.1-201ENST00000355719 319 ntBASIC2.9□□□□□ -1.95
BDNFP23560 U8.3-201ENST00000363321 132 ntBASIC2.9□□□□□ -1.95
BDNFP23560 MT-TH-201ENST00000387441 69 ntBASIC2.9□□□□□ -1.95
BDNFP23560 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
BDNFP23560 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.9□□□□□ -1.95
BDNFP23560 CYCSP46-201ENST00000423569 204 ntBASIC2.9□□□□□ -1.95
BDNFP23560 MTCYBP5-201ENST00000423752 1135 ntBASIC2.9□□□□□ -1.95
BDNFP23560 AC104850.1-201ENST00000435940 476 ntBASIC2.9□□□□□ -1.95
BDNFP23560 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.9□□□□□ -1.95
BDNFP23560 RPL7P43-201ENST00000478876 753 ntBASIC2.9□□□□□ -1.95
BDNFP23560 Y_RNA.717-201ENST00000517106 92 ntBASIC2.9□□□□□ -1.95
BDNFP23560 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.9□□□□□ -1.95
BDNFP23560 MIR3126-201ENST00000577443 74 ntBASIC2.9□□□□□ -1.95
BDNFP23560 DEFB131E-202ENST00000602581 683 ntBASIC2.9□□□□□ -1.95
BDNFP23560 AC021646.1-201ENST00000605469 484 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms