Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AL353621.1-201ENST00000418219 243 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.8□□□□□ -2.12
USF1P22415 AL022400.1-201ENST00000423946 935 ntBASIC1.8□□□□□ -2.12
USF1P22415 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AL591704.1-201ENST00000432574 275 ntBASIC1.8□□□□□ -2.12
USF1P22415 RPL7P34-201ENST00000433316 712 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.8□□□□□ -2.12
USF1P22415 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.8□□□□□ -2.12
USF1P22415 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.8□□□□□ -2.12
USF1P22415 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.8□□□□□ -2.12
USF1P22415 BTF3P15-201ENST00000455606 336 ntBASIC1.8□□□□□ -2.12
USF1P22415 MTCO1P42-201ENST00000457379 726 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC117503.1-201ENST00000472241 394 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USF1P22415 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.8□□□□□ -2.12
USF1P22415 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USF1P22415 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
USF1P22415 RNU6-201P-201ENST00000517100 61 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC079598.5-201ENST00000547460 117 ntBASIC1.8□□□□□ -2.12
USF1P22415 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.8□□□□□ -2.12
USF1P22415 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
USF1P22415 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.8□□□□□ -2.12
USF1P22415 AC105148.1-201ENST00000604961 409 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC013244.3-201ENST00000605614 388 ntBASIC1.8□□□□□ -2.12
USF1P22415 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.8□□□□□ -2.12
USF1P22415 AC010378.1-201ENST00000619270 362 ntBASIC1.8□□□□□ -2.12
USF1P22415 AL589994.2-201ENST00000621124 579 ntBASIC1.8□□□□□ -2.12
USF1P22415 MTND4P1-201ENST00000457501 1466 ntBASIC1.8□□□□□ -2.12
USF1P22415 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.79□□□□□ -2.12
USF1P22415 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.79□□□□□ -2.12
USF1P22415 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
USF1P22415 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.79□□□□□ -2.12
USF1P22415 Y_RNA.18-201ENST00000362461 102 ntBASIC1.79□□□□□ -2.12
USF1P22415 RNU6-898P-201ENST00000365627 104 ntBASIC1.79□□□□□ -2.12
USF1P22415 SMIM11P1-201ENST00000369586 178 ntBASIC1.79□□□□□ -2.12
USF1P22415 OR5H15-201ENST00000383696 930 ntBASIC1.79□□□□□ -2.12
USF1P22415 Y_RNA.534-201ENST00000384599 112 ntBASIC1.79□□□□□ -2.12
USF1P22415 SNORA46.1-201ENST00000391069 153 ntBASIC1.79□□□□□ -2.12
USF1P22415 RNU2-36P-201ENST00000410361 191 ntBASIC1.79□□□□□ -2.12
USF1P22415 RNU6-1140P-201ENST00000410517 106 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC006366.1-201ENST00000422002 759 ntBASIC1.79□□□□□ -2.12
USF1P22415 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.79□□□□□ -2.12
USF1P22415 AL353777.1-201ENST00000425552 326 ntBASIC1.79□□□□□ -2.12
USF1P22415 MTND1P20-201ENST00000430341 950 ntBASIC1.79□□□□□ -2.12
USF1P22415 AL591212.2-201ENST00000433923 257 ntBASIC1.79□□□□□ -2.12
USF1P22415 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.79□□□□□ -2.12
USF1P22415 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.79□□□□□ -2.12
USF1P22415 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.79□□□□□ -2.12
USF1P22415 CYP2C59P-201ENST00000457790 269 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC104435.1-201ENST00000483483 166 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC109486.1-201ENST00000486833 374 ntBASIC1.79□□□□□ -2.12
USF1P22415 SNORA25.11-201ENST00000515935 105 ntBASIC1.79□□□□□ -2.12
USF1P22415 RNU6-677P-201ENST00000516914 101 ntBASIC1.79□□□□□ -2.12
USF1P22415 SNORA31.19-201ENST00000517079 126 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.79□□□□□ -2.12
USF1P22415 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.79□□□□□ -2.12
USF1P22415 CYCSP26-201ENST00000534107 320 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.79□□□□□ -2.12
USF1P22415 ARL2BPP2-201ENST00000550907 489 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.79□□□□□ -2.12
USF1P22415 AP001004.1-201ENST00000582468 324 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC002984.1-201ENST00000591692 448 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC174048.1-201ENST00000603389 144 ntBASIC1.79□□□□□ -2.12
USF1P22415 AC025811.1-201ENST00000604312 472 ntBASIC1.79□□□□□ -2.12
USF1P22415 RNU6-91P-201ENST00000607774 107 ntBASIC1.79□□□□□ -2.12
USF1P22415 AL607023.1-201ENST00000620045 248 ntBASIC1.79□□□□□ -2.12
USF1P22415 AL162373.1-201ENST00000620433 407 ntBASIC1.79□□□□□ -2.12
USF1P22415 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.79□□□□□ -2.12
USF1P22415 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.79□□□□□ -2.12
USF1P22415 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.79□□□□□ -2.12
USF1P22415 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
USF1P22415 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.78□□□□□ -2.12
USF1P22415 AC138393.1-203ENST00000327086 343 ntBASIC1.78□□□□□ -2.12
USF1P22415 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USF1P22415 RNU6-511P-201ENST00000363496 107 ntBASIC1.78□□□□□ -2.12
USF1P22415 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
USF1P22415 U8.14-201ENST00000390843 143 ntBASIC1.78□□□□□ -2.12
USF1P22415 RPS20P2-201ENST00000402520 389 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL023284.1-201ENST00000403956 276 ntBASIC1.78□□□□□ -2.12
USF1P22415 FCF1P10-201ENST00000407590 479 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.78□□□□□ -2.12
USF1P22415 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.78□□□□□ -2.12
USF1P22415 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.78□□□□□ -2.12
USF1P22415 AL353706.1-201ENST00000436728 494 ntBASIC1.78□□□□□ -2.12
USF1P22415 CR769776.1-201ENST00000441254 787 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL078601.1-201ENST00000444542 271 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC003071.1-201ENST00000451219 789 ntBASIC1.78□□□□□ -2.12
USF1P22415 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.78□□□□□ -2.12
USF1P22415 AC112771.1-201ENST00000463581 102 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC011005.2-201ENST00000487324 359 ntBASIC1.78□□□□□ -2.12
USF1P22415 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.78□□□□□ -2.12
USF1P22415 CKS1BP2-201ENST00000497342 240 ntBASIC1.78□□□□□ -2.12
USF1P22415 HSPE1P23-201ENST00000509838 286 ntBASIC1.78□□□□□ -2.12
USF1P22415 RNU5B-3P-201ENST00000516601 115 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms