Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 OR2AM1P-201ENST00000422137 422 ntBASIC4.44□□□□□ -1.7
NID1P14543 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 RNU6-1211P-201ENST00000459179 105 ntBASIC4.44□□□□□ -1.7
NID1P14543 RPS20P22-201ENST00000473700 357 ntBASIC4.44□□□□□ -1.7
NID1P14543 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.44□□□□□ -1.7
NID1P14543 AC093840.1-201ENST00000511599 336 ntBASIC4.44□□□□□ -1.7
NID1P14543 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.44□□□□□ -1.7
NID1P14543 SNORA25.12-201ENST00000516202 82 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNU6-191P-201ENST00000516295 94 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNU6-572P-201ENST00000516724 80 ntBASIC4.44□□□□□ -1.7
NID1P14543 RNA5SP165-201ENST00000517142 115 ntBASIC4.44□□□□□ -1.7
NID1P14543 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.44□□□□□ -1.7
NID1P14543 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.44□□□□□ -1.7
NID1P14543 AC022441.3-201ENST00000605737 136 ntBASIC4.44□□□□□ -1.7
NID1P14543 AL008718.3-201ENST00000610217 321 ntBASIC4.44□□□□□ -1.7
NID1P14543 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
NID1P14543 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 AC027309.3-201ENST00000623419 351 ntBASIC4.44□□□□□ -1.7
NID1P14543 SCARNA4-202ENST00000625402 129 ntBASIC4.44□□□□□ -1.7
NID1P14543 AC241585.2-209ENST00000638217 143 ntBASIC4.44□□□□□ -1.7
NID1P14543 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 AC110774.1-201ENST00000623567 2018 ntBASIC4.44□□□□□ -1.7
NID1P14543 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NID1P14543 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.44□□□□□ -1.7
NID1P14543 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.43□□□□□ -1.7
NID1P14543 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 TLK1P1-201ENST00000456760 2440 ntBASIC4.43□□□□□ -1.7
NID1P14543 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.43□□□□□ -1.7
NID1P14543 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NID1P14543 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 RNU4-80P-201ENST00000363200 141 ntBASIC4.43□□□□□ -1.7
NID1P14543 RNU6-275P-201ENST00000364910 107 ntBASIC4.43□□□□□ -1.7
NID1P14543 MIR192-201ENST00000384915 110 ntBASIC4.43□□□□□ -1.7
NID1P14543 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 HLFP1-201ENST00000402375 499 ntBASIC4.43□□□□□ -1.7
NID1P14543 BTF3P11-201ENST00000426582 477 ntBASIC4.43□□□□□ -1.7
NID1P14543 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.43□□□□□ -1.7
NID1P14543 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 RPL12P46-201ENST00000436610 195 ntBASIC4.43□□□□□ -1.7
NID1P14543 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.43□□□□□ -1.7
NID1P14543 RNA5SP103-201ENST00000459503 118 ntBASIC4.43□□□□□ -1.7
NID1P14543 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
NID1P14543 PDCD5P2-201ENST00000507570 312 ntBASIC4.43□□□□□ -1.7
NID1P14543 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 RNU6-1234P-201ENST00000516877 103 ntBASIC4.43□□□□□ -1.7
NID1P14543 RNA5SP290-201ENST00000517133 127 ntBASIC4.43□□□□□ -1.7
NID1P14543 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.43□□□□□ -1.7
NID1P14543 AL121603.1-201ENST00000553815 142 ntBASIC4.43□□□□□ -1.7
NID1P14543 AC209154.1-201ENST00000582156 337 ntBASIC4.43□□□□□ -1.7
NID1P14543 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.43□□□□□ -1.7
NID1P14543 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.43□□□□□ -1.7
NID1P14543 MIR6758-201ENST00000620653 63 ntBASIC4.43□□□□□ -1.7
NID1P14543 AC008873.1-201ENST00000625051 138 ntBASIC4.43□□□□□ -1.7
NID1P14543 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NID1P14543 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 SALL4P2-201ENST00000423288 2910 ntBASIC4.43□□□□□ -1.7
NID1P14543 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
NID1P14543 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NID1P14543 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NID1P14543 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NID1P14543 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 RNU6-527P-201ENST00000363425 104 ntBASIC4.42□□□□□ -1.7
NID1P14543 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NID1P14543 RNU6-1056P-201ENST00000383996 107 ntBASIC4.42□□□□□ -1.7
NID1P14543 RNA5SP44-201ENST00000410446 133 ntBASIC4.42□□□□□ -1.7
NID1P14543 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.42□□□□□ -1.7
NID1P14543 AC114755.2-201ENST00000413520 361 ntBASIC4.42□□□□□ -1.7
NID1P14543 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 AC245028.1-201ENST00000423259 256 ntBASIC4.42□□□□□ -1.7
NID1P14543 CKS1BP5-201ENST00000434172 273 ntBASIC4.42□□□□□ -1.7
NID1P14543 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.42□□□□□ -1.7
NID1P14543 ANP32BP2-201ENST00000454525 545 ntBASIC4.42□□□□□ -1.7
NID1P14543 RN7SL481P-201ENST00000477764 299 ntBASIC4.42□□□□□ -1.7
NID1P14543 RPL31P13-201ENST00000484151 370 ntBASIC4.42□□□□□ -1.7
NID1P14543 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.42□□□□□ -1.7
NID1P14543 RNU7-121P-201ENST00000516604 62 ntBASIC4.42□□□□□ -1.7
NID1P14543 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.42□□□□□ -1.7
NID1P14543 UBL5P4-201ENST00000562584 236 ntBASIC4.42□□□□□ -1.7
NID1P14543 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.42□□□□□ -1.7
NID1P14543 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
NID1P14543 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.42□□□□□ -1.7
NID1P14543 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms