Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU7-170P-201ENST00000459303 61 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC133134.1-201ENST00000466800 359 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC139453.3-201ENST00000493276 369 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC093840.1-201ENST00000511599 336 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 SNORA31.19-201ENST00000517079 126 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 RNA5SP165-201ENST00000517142 115 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC022616.4-201ENST00000522985 181 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 CBX3P8-201ENST00000532412 525 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.96□□□□□ -1.78
COL6A2P12110 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.96□□□□□ -1.78
COL6A2P12110 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AL138825.1-201ENST00000618587 192 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 U7.8-201ENST00000619968 63 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC138627.2-201ENST00000624202 601 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
COL6A2P12110 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.96□□□□□ -1.78
COL6A2P12110 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
COL6A2P12110 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL6A2P12110 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL6A2P12110 RNY1P16-201ENST00000363063 111 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RNA5SP509-201ENST00000364577 119 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RNU6-1317P-201ENST00000364582 104 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 Y_RNA.389-201ENST00000383924 113 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 MIR10A-201ENST00000385043 110 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 MIR34A-201ENST00000385130 110 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 MT-TG-201ENST00000387429 68 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RNU6-823P-201ENST00000391042 103 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 HMGN2P8-201ENST00000391458 268 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RNU6-101P-201ENST00000410323 104 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RNU6-1156P-201ENST00000410365 100 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RPL17P36-201ENST00000420302 549 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 PGBD4P6-201ENST00000421501 610 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.95□□□□□ -1.78
COL6A2P12110 EIF4EP2-201ENST00000422816 654 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC006946.1-201ENST00000429106 328 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AL731563.1-201ENST00000442202 214 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.95□□□□□ -1.78
COL6A2P12110 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
COL6A2P12110 U8.20-201ENST00000459445 131 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC011276.1-201ENST00000469688 323 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.95□□□□□ -1.78
COL6A2P12110 AP002404.1-201ENST00000532005 451 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.95□□□□□ -1.78
COL6A2P12110 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.95□□□□□ -1.78
COL6A2P12110 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
COL6A2P12110 VN1R107P-201ENST00000601784 209 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC016727.2-201ENST00000603988 621 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AC004805.2-201ENST00000605382 482 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 MIR3976-201ENST00000606807 139 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.95□□□□□ -1.78
COL6A2P12110 AC099506.2-201ENST00000623074 221 ntBASIC3.95□□□□□ -1.78
COL6A2P12110 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL6A2P12110 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL6A2P12110 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL6A2P12110 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.95□□□□□ -1.78
COL6A2P12110 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL6A2P12110 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL6A2P12110 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL6A2P12110 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL6A2P12110 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 CDC27P3-201ENST00000635418 1910 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 RNU6-99P-201ENST00000364721 107 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 RNU6-827P-201ENST00000365553 106 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 Y_RNA.485-201ENST00000384395 102 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 Y_RNA.574-201ENST00000384766 95 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 NUP35P1-201ENST00000422734 947 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AL159987.2-201ENST00000432754 307 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 VDAC1P3-201ENST00000434069 851 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 SNRPEP9-201ENST00000436794 238 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AL078601.1-201ENST00000444542 271 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.94□□□□□ -1.78
COL6A2P12110 AL353752.1-201ENST00000454946 260 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC092798.1-201ENST00000458542 409 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 RPL21P104-201ENST00000464143 478 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 SNRPGP3-201ENST00000469405 227 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC114801.2-201ENST00000503825 781 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 SNORA40.14-201ENST00000516543 86 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 RNU6-1282P-201ENST00000516735 96 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 IGKV2-23-201ENST00000518729 323 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.94□□□□□ -1.78
COL6A2P12110 AL161670.1-201ENST00000554348 137 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 ZNF192P1-203ENST00000565888 810 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 MIR5696-201ENST00000578474 85 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC008121.1-201ENST00000603244 268 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AL355297.3-201ENST00000604082 446 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 MIR8076-201ENST00000611401 83 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC004852.3-201ENST00000614131 326 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 MIR8059-201ENST00000620427 81 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC011944.2-201ENST00000624440 683 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.94□□□□□ -1.78
COL6A2P12110 MIR4272-201ENST00000635924 64 ntBASIC3.94□□□□□ -1.78
COL6A2P12110 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms