Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SNORD53-201ENST00000579969 78 ntBASIC2.75□□□□□ -1.97
VTNP04004 AC092954.2-201ENST00000609103 430 ntBASIC2.75□□□□□ -1.97
VTNP04004 AC034102.8-201ENST00000615146 484 ntBASIC2.75□□□□□ -1.97
VTNP04004 AL359880.1-201ENST00000621879 266 ntBASIC2.75□□□□□ -1.97
VTNP04004 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 API5P2-201ENST00000397055 1498 ntBASIC2.75□□□□□ -1.97
VTNP04004 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.75□□□□□ -1.97
VTNP04004 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.75□□□□□ -1.97
VTNP04004 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.75□□□□□ -1.97
VTNP04004 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 ELF2P3-201ENST00000445099 1506 ntBASIC2.74□□□□□ -1.97
VTNP04004 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VTNP04004 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VTNP04004 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VTNP04004 Y_RNA.245-201ENST00000364493 95 ntBASIC2.74□□□□□ -1.97
VTNP04004 RNU6-1035P-201ENST00000384477 107 ntBASIC2.74□□□□□ -1.97
VTNP04004 AL139397.2-201ENST00000404529 772 ntBASIC2.74□□□□□ -1.97
VTNP04004 MIR548F1-201ENST00000408667 84 ntBASIC2.74□□□□□ -1.97
VTNP04004 RNU2-33P-201ENST00000410344 192 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 RPL7P46-201ENST00000425129 740 ntBASIC2.74□□□□□ -1.97
VTNP04004 RPS3AP44-201ENST00000425466 790 ntBASIC2.74□□□□□ -1.97
VTNP04004 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.74□□□□□ -1.97
VTNP04004 MTND1P4-201ENST00000435196 415 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
VTNP04004 RPL7P54-201ENST00000438336 674 ntBASIC2.74□□□□□ -1.97
VTNP04004 DDX3P2-201ENST00000446138 111 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.74□□□□□ -1.97
VTNP04004 RNU7-182P-201ENST00000459009 62 ntBASIC2.74□□□□□ -1.97
VTNP04004 RPL23AP45-201ENST00000476406 468 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC006483.1-201ENST00000487308 313 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC104806.1-201ENST00000508720 308 ntBASIC2.74□□□□□ -1.97
VTNP04004 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.74□□□□□ -1.97
VTNP04004 RNU6-143P-201ENST00000516942 93 ntBASIC2.74□□□□□ -1.97
VTNP04004 ATP5F1P5-201ENST00000526403 760 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.74□□□□□ -1.97
VTNP04004 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
VTNP04004 AL512360.1-201ENST00000555346 234 ntBASIC2.74□□□□□ -1.97
VTNP04004 AL359212.1-201ENST00000556608 614 ntBASIC2.74□□□□□ -1.97
VTNP04004 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
VTNP04004 AC068135.2-201ENST00000569293 1028 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC024619.4-201ENST00000580924 316 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC010620.2-201ENST00000600135 313 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC098826.3-201ENST00000603823 466 ntBASIC2.74□□□□□ -1.97
VTNP04004 AC022893.3-201ENST00000607665 437 ntBASIC2.74□□□□□ -1.97
VTNP04004 AL354950.2-201ENST00000617939 290 ntBASIC2.74□□□□□ -1.97
VTNP04004 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.74□□□□□ -1.97
VTNP04004 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
VTNP04004 MTND1P37-201ENST00000636562 264 ntBASIC2.74□□□□□ -1.97
VTNP04004 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VTNP04004 AC010680.1-201ENST00000590024 3590 ntBASIC2.74□□□□□ -1.97
VTNP04004 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
VTNP04004 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
VTNP04004 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VTNP04004 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.73□□□□□ -1.97
VTNP04004 RNU6-1287P-201ENST00000362914 107 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU4-12P-201ENST00000365233 139 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU1-100P-201ENST00000365255 165 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU6-61P-201ENST00000365528 109 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU4-48P-201ENST00000365559 182 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU6-1060P-201ENST00000384664 107 ntBASIC2.73□□□□□ -1.97
VTNP04004 MIR454-201ENST00000390180 115 ntBASIC2.73□□□□□ -1.97
VTNP04004 USP9YP6-201ENST00000413550 854 ntBASIC2.73□□□□□ -1.97
VTNP04004 UBE2V1P10-201ENST00000414685 269 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.73□□□□□ -1.97
VTNP04004 OR51A5P-201ENST00000415429 942 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC092047.1-201ENST00000424997 240 ntBASIC2.73□□□□□ -1.97
VTNP04004 MTCO3P30-201ENST00000426425 670 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.73□□□□□ -1.97
VTNP04004 AL592045.1-201ENST00000429867 352 ntBASIC2.73□□□□□ -1.97
VTNP04004 AL606489.2-201ENST00000433886 234 ntBASIC2.73□□□□□ -1.97
VTNP04004 MTND1P18-201ENST00000448191 573 ntBASIC2.73□□□□□ -1.97
VTNP04004 CECR9-201ENST00000453421 199 ntBASIC2.73□□□□□ -1.97
VTNP04004 AL162395.1-201ENST00000457882 422 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU7-63P-201ENST00000459054 62 ntBASIC2.73□□□□□ -1.97
VTNP04004 snoU13.28-201ENST00000459235 104 ntBASIC2.73□□□□□ -1.97
VTNP04004 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.73□□□□□ -1.97
VTNP04004 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.73□□□□□ -1.97
VTNP04004 RN7SL636P-201ENST00000497504 294 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC008549.1-201ENST00000512900 643 ntBASIC2.73□□□□□ -1.97
VTNP04004 SNORA31.3-201ENST00000516029 96 ntBASIC2.73□□□□□ -1.97
VTNP04004 RNU6-718P-201ENST00000516166 105 ntBASIC2.73□□□□□ -1.97
VTNP04004 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.73□□□□□ -1.97
VTNP04004 AP003072.2-201ENST00000527756 676 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC136619.2-201ENST00000563361 631 ntBASIC2.73□□□□□ -1.97
VTNP04004 BNIP3P9-201ENST00000603714 553 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC126118.1-201ENST00000607744 628 ntBASIC2.73□□□□□ -1.97
VTNP04004 AL161629.2-201ENST00000615347 275 ntBASIC2.73□□□□□ -1.97
VTNP04004 AC064859.1-201ENST00000624741 174 ntBASIC2.73□□□□□ -1.97
VTNP04004 MTND5P42-201ENST00000637720 498 ntBASIC2.73□□□□□ -1.97
VTNP04004 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
VTNP04004 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
VTNP04004 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
VTNP04004 RNA5SP139-201ENST00000364340 117 ntBASIC2.72□□□□□ -1.97
VTNP04004 RNU6-198P-201ENST00000384258 104 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms