Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 Y_RNA.472-201ENST00000384322 102 ntBASIC1.67□□□□□ -2.14
VAPBO95292 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VAPBO95292 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPBO95292 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.67□□□□□ -2.14
VAPBO95292 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPBO95292 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.67□□□□□ -2.14
VAPBO95292 RNU6-953P-201ENST00000459154 107 ntBASIC1.67□□□□□ -2.14
VAPBO95292 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPBO95292 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
VAPBO95292 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
VAPBO95292 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPBO95292 AP005639.2-201ENST00000527592 928 ntBASIC1.67□□□□□ -2.14
VAPBO95292 AP000907.2-201ENST00000530827 353 ntBASIC1.67□□□□□ -2.14
VAPBO95292 OR5B19P-201ENST00000531766 928 ntBASIC1.67□□□□□ -2.14
VAPBO95292 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.67□□□□□ -2.14
VAPBO95292 MIR4293-201ENST00000584305 78 ntBASIC1.67□□□□□ -2.14
VAPBO95292 SNRPGP17-201ENST00000603780 214 ntBASIC1.67□□□□□ -2.14
VAPBO95292 AL512643.1-201ENST00000635735 524 ntBASIC1.67□□□□□ -2.14
VAPBO95292 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
VAPBO95292 MIR301A-201ENST00000385261 86 ntBASIC1.66□□□□□ -2.14
VAPBO95292 RNU6-817P-201ENST00000391083 104 ntBASIC1.66□□□□□ -2.14
VAPBO95292 RPS20P15-201ENST00000412792 311 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AC138623.1-201ENST00000418060 216 ntBASIC1.66□□□□□ -2.14
VAPBO95292 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 HMGB3P12-201ENST00000438745 556 ntBASIC1.66□□□□□ -2.14
VAPBO95292 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPBO95292 AC012308.1-201ENST00000451232 178 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPBO95292 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPBO95292 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPBO95292 RNU6-678P-201ENST00000516832 109 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AP006587.4-201ENST00000526053 529 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.66□□□□□ -2.14
VAPBO95292 DUXAP5-201ENST00000529668 529 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPBO95292 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPBO95292 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 AC107952.2-201ENST00000606048 486 ntBASIC1.66□□□□□ -2.14
VAPBO95292 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPBO95292 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPBO95292 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPBO95292 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPBO95292 SNORD114-19-201ENST00000363072 75 ntBASIC1.65□□□□□ -2.15
VAPBO95292 Y_RNA.465-201ENST00000384293 102 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AL591034.2-201ENST00000402839 359 ntBASIC1.65□□□□□ -2.15
VAPBO95292 POLHP1-201ENST00000411806 470 ntBASIC1.65□□□□□ -2.15
VAPBO95292 SNORD56-201ENST00000413522 71 ntBASIC1.65□□□□□ -2.15
VAPBO95292 IFNA20P-201ENST00000436840 528 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.65□□□□□ -2.15
VAPBO95292 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPBO95292 AC055855.1-201ENST00000489563 579 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.65□□□□□ -2.15
VAPBO95292 AC116353.3-201ENST00000511215 249 ntBASIC1.65□□□□□ -2.15
VAPBO95292 SNORA31.19-201ENST00000517079 126 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.65□□□□□ -2.15
VAPBO95292 AC010376.1-201ENST00000522101 334 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPBO95292 NDUFA5P6-201ENST00000542110 379 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPBO95292 AL606834.3-201ENST00000602615 496 ntBASIC1.65□□□□□ -2.15
VAPBO95292 ELOCP5-201ENST00000604924 333 ntBASIC1.65□□□□□ -2.15
VAPBO95292 RNU6-88P-201ENST00000606801 100 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AC106052.1-201ENST00000608029 497 ntBASIC1.65□□□□□ -2.15
VAPBO95292 AL121895.2-201ENST00000619558 447 ntBASIC1.65□□□□□ -2.15
VAPBO95292 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
VAPBO95292 RNU1-23P-201ENST00000363361 144 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPBO95292 RNU6-1257P-201ENST00000384625 110 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AC119751.3-201ENST00000399720 670 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPBO95292 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 HMGN2P3-201ENST00000433603 273 ntBASIC1.64□□□□□ -2.15
VAPBO95292 HMGN2P5-201ENST00000436882 273 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 AL078601.1-201ENST00000444542 271 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.64□□□□□ -2.15
VAPBO95292 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 MTCYBP43-201ENST00000513621 740 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 RNU6-295P-201ENST00000516901 104 ntBASIC1.64□□□□□ -2.15
VAPBO95292 RNU6-586P-201ENST00000517265 104 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPBO95292 MTND1P36-201ENST00000522384 936 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AC084851.1-201ENST00000529105 249 ntBASIC1.64□□□□□ -2.15
VAPBO95292 RPS3AP4-201ENST00000555161 764 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AC011494.1-201ENST00000596454 237 ntBASIC1.64□□□□□ -2.15
VAPBO95292 RPL30P11-203ENST00000598995 310 ntBASIC1.64□□□□□ -2.15
VAPBO95292 NDUFA8P1-201ENST00000605525 367 ntBASIC1.64□□□□□ -2.15
VAPBO95292 AC107308.1-201ENST00000615897 301 ntBASIC1.64□□□□□ -2.15
VAPBO95292 Z99571.1-201ENST00000636677 394 ntBASIC1.64□□□□□ -2.15
VAPBO95292 RNU6-858P-201ENST00000362436 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms