Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 VN1R36P-201ENST00000414936 291 ntBASIC1.54□□□□□ -2.16
SGCEO43556 AC083875.1-201ENST00000419509 405 ntBASIC1.54□□□□□ -2.16
SGCEO43556 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.54□□□□□ -2.16
SGCEO43556 HMGB3P12-201ENST00000438745 556 ntBASIC1.54□□□□□ -2.16
SGCEO43556 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.54□□□□□ -2.16
SGCEO43556 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.54□□□□□ -2.16
SGCEO43556 AC006512.1-201ENST00000468816 291 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RPL7P43-201ENST00000478876 753 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RPL21P99-201ENST00000480369 423 ntBASIC1.54□□□□□ -2.16
SGCEO43556 AC104629.1-201ENST00000494226 508 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RPS29P11-201ENST00000496507 171 ntBASIC1.54□□□□□ -2.16
SGCEO43556 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.54□□□□□ -2.16
SGCEO43556 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SGCEO43556 AC109445.1-201ENST00000512356 383 ntBASIC1.54□□□□□ -2.16
SGCEO43556 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.54□□□□□ -2.16
SGCEO43556 RNU6-586P-201ENST00000517265 104 ntBASIC1.54□□□□□ -2.16
SGCEO43556 AP006587.4-201ENST00000526053 529 ntBASIC1.54□□□□□ -2.16
SGCEO43556 DUXAP5-201ENST00000529668 529 ntBASIC1.54□□□□□ -2.16
SGCEO43556 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
SGCEO43556 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.54□□□□□ -2.16
SGCEO43556 RPS3AP4-201ENST00000555161 764 ntBASIC1.54□□□□□ -2.16
SGCEO43556 MIR4293-201ENST00000584305 78 ntBASIC1.54□□□□□ -2.16
SGCEO43556 RPL30P11-203ENST00000598995 310 ntBASIC1.54□□□□□ -2.16
SGCEO43556 AC068620.3-201ENST00000602749 560 ntBASIC1.54□□□□□ -2.16
SGCEO43556 NDUFA8P1-201ENST00000605525 367 ntBASIC1.54□□□□□ -2.16
SGCEO43556 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.54□□□□□ -2.16
SGCEO43556 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.54□□□□□ -2.16
SGCEO43556 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.54□□□□□ -2.16
SGCEO43556 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
SGCEO43556 MIR301A-201ENST00000385261 86 ntBASIC1.53□□□□□ -2.16
SGCEO43556 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
SGCEO43556 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SGCEO43556 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SGCEO43556 RPL23AP39-201ENST00000415533 405 ntBASIC1.53□□□□□ -2.16
SGCEO43556 EIF4EP2-201ENST00000422816 654 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AL592045.1-201ENST00000429867 352 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AL645568.3-201ENST00000433683 316 ntBASIC1.53□□□□□ -2.16
SGCEO43556 RPL7P54-201ENST00000438336 674 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.53□□□□□ -2.16
SGCEO43556 MTND4P25-201ENST00000441039 533 ntBASIC1.53□□□□□ -2.16
SGCEO43556 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.53□□□□□ -2.16
SGCEO43556 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
SGCEO43556 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.53□□□□□ -2.16
SGCEO43556 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SGCEO43556 RNU6-953P-201ENST00000459154 107 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.53□□□□□ -2.16
SGCEO43556 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.53□□□□□ -2.16
SGCEO43556 AC096745.1-201ENST00000509945 370 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AC079395.1-201ENST00000510981 262 ntBASIC1.53□□□□□ -2.16
SGCEO43556 MTCYBP43-201ENST00000513621 740 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
SGCEO43556 AC009712.1-201ENST00000564938 316 ntBASIC1.53□□□□□ -2.16
SGCEO43556 MTND4LP25-201ENST00000570218 163 ntBASIC1.53□□□□□ -2.16
SGCEO43556 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
SGCEO43556 Z99571.1-201ENST00000636677 394 ntBASIC1.53□□□□□ -2.16
SGCEO43556 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SGCEO43556 RNU6-413P-201ENST00000384115 107 ntBASIC1.52□□□□□ -2.17
SGCEO43556 RNU1-57P-201ENST00000384491 166 ntBASIC1.52□□□□□ -2.17
SGCEO43556 RNU6-817P-201ENST00000391083 104 ntBASIC1.52□□□□□ -2.17
SGCEO43556 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SGCEO43556 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SGCEO43556 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.52□□□□□ -2.17
SGCEO43556 AC007327.1-201ENST00000447461 264 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC245102.2-201ENST00000448956 180 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC104564.1-201ENST00000493028 407 ntBASIC1.52□□□□□ -2.17
SGCEO43556 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
SGCEO43556 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
SGCEO43556 SUMO2P5-201ENST00000506790 245 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.52□□□□□ -2.17
SGCEO43556 AC084851.1-201ENST00000529105 249 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AP003168.1-201ENST00000530091 307 ntBASIC1.52□□□□□ -2.17
SGCEO43556 DEFB108A-201ENST00000530110 222 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC018638.7-201ENST00000605836 1114 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC012150.2-201ENST00000621300 544 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
SGCEO43556 AL136313.1-201ENST00000624804 202 ntBASIC1.52□□□□□ -2.17
SGCEO43556 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
SGCEO43556 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.51□□□□□ -2.17
SGCEO43556 RNU6-462P-201ENST00000362659 105 ntBASIC1.51□□□□□ -2.17
SGCEO43556 RNU6-14P-201ENST00000384630 106 ntBASIC1.51□□□□□ -2.17
SGCEO43556 MIR518D-201ENST00000385014 87 ntBASIC1.51□□□□□ -2.17
SGCEO43556 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
SGCEO43556 RNU6-298P-201ENST00000390888 96 ntBASIC1.51□□□□□ -2.17
SGCEO43556 OOSP1P1-201ENST00000423265 274 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.51□□□□□ -2.17
SGCEO43556 NEFMP1-201ENST00000443423 1006 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC108059.3-201ENST00000456388 214 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.51□□□□□ -2.17
SGCEO43556 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.51□□□□□ -2.17
SGCEO43556 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
SGCEO43556 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SGCEO43556 RNU6-667P-201ENST00000517186 102 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC009902.1-201ENST00000519351 183 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
SGCEO43556 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
SGCEO43556 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.51□□□□□ -2.17
SGCEO43556 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.51□□□□□ -2.17
SGCEO43556 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms