Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NDUFS5P3-201ENST00000450668 321 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 snoU13.1-201ENST00000459157 104 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 RNU6-625P-201ENST00000459412 107 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 SNRPGP7-201ENST00000469016 106 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 SNORA70.16-201ENST00000516390 95 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 RNA5SP54-201ENST00000516951 92 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 AC090281.1-201ENST00000523019 276 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 HSPE1P4-201ENST00000550617 308 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 AC209154.1-201ENST00000582156 337 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 AL357075.2-201ENST00000614906 189 ntBASIC5.29□□□□□ -1.56
HOXA2O43364 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA2O43364 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXA2O43364 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA2O43364 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA2O43364 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA2O43364 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA2O43364 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXA2O43364 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA2O43364 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA2O43364 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HOXA2O43364 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA2O43364 AL592182.3-201ENST00000642132 3304 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 SNORA73.1-201ENST00000363107 205 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 Z98749.2-208ENST00000381646 500 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 RNU6-1181P-201ENST00000384191 106 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 MIR518D-201ENST00000385014 87 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 GPS2P1-201ENST00000411761 986 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA2O43364 snoU13.4-201ENST00000458916 104 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 RPL23AP14-201ENST00000468281 468 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AC097462.2-201ENST00000504623 481 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA2O43364 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXA2O43364 Y_RNA.719-201ENST00000517156 106 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA2O43364 MIR3145-201ENST00000580727 82 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA2O43364 AC020895.1-201ENST00000595362 272 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AC019159.1-201ENST00000605094 187 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 AL008718.3-201ENST00000610217 321 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA2O43364 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA2O43364 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
HOXA2O43364 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA2O43364 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA2O43364 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXA2O43364 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXA2O43364 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA2O43364 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA2O43364 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HOXA2O43364 SNORD56.1-201ENST00000362913 68 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 RNU6-873P-201ENST00000363833 107 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 MIR569-201ENST00000385228 96 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 SNORA40-201ENST00000388090 126 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 RNA5SP332-201ENST00000391063 115 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 RPL7AP25-201ENST00000423357 805 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA2O43364 BTF3P6-201ENST00000448054 499 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 MTATP6P7-201ENST00000453315 681 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 AL645939.1-201ENST00000453429 797 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 snoU13.24-201ENST00000458998 104 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 RN7SL385P-201ENST00000468873 276 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 SCARNA22-201ENST00000503991 125 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA2O43364 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXA2O43364 MIR548X2-201ENST00000579776 100 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 SNRPGP15-201ENST00000600149 222 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 AC092628.2-201ENST00000622492 339 ntBASIC5.27□□□□□ -1.57
HOXA2O43364 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA2O43364 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA2O43364 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA2O43364 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA2O43364 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
HOXA2O43364 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA2O43364 MARK2P15-201ENST00000432204 2186 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA2O43364 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA2O43364 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA2O43364 RNU6-140P-201ENST00000384566 108 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 U3.30-201ENST00000391308 210 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA2O43364 AC112220.1-201ENST00000434628 355 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 RPS15AP5-201ENST00000436276 388 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA2O43364 AL691482.1-201ENST00000453255 87 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA2O43364 AL121594.1-201ENST00000475906 575 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA2O43364 HMGB1P22-201ENST00000505315 124 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA2O43364 AC022726.1-201ENST00000587475 207 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms