Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL10P17-201ENST00000453852 316 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 SNRPGP8-201ENST00000454064 226 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 RNU6-1256P-201ENST00000516539 103 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SL290P-201ENST00000578661 300 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AC007448.1-201ENST00000582714 234 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 FO393422.1-201ENST00000603908 708 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AC019159.1-201ENST00000605094 187 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 AL359198.2-201ENST00000611836 194 ntBASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS9D1Q9Y2B5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 DEFB108F-201ENST00000344638 222 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RNA5SP242-201ENST00000364171 118 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 SNORD12C-201ENST00000386307 89 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RNU6-440P-201ENST00000390882 105 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RNA5SP487-201ENST00000410186 122 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SKP293-201ENST00000411389 296 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC245028.1-201ENST00000423259 256 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 SRSF1P1-201ENST00000424058 520 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC007969.2-201ENST00000441891 191 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC009237.8-201ENST00000445492 379 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AL451050.1-201ENST00000450126 415 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SL273P-201ENST00000481561 299 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SKP234-201ENST00000517173 224 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AL121603.1-201ENST00000553815 142 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC015720.1-201ENST00000565251 277 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 MIR1273E-201ENST00000581165 102 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AL356575.1-201ENST00000603008 283 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC074101.1-201ENST00000637861 241 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 AC112198.2-201ENST00000426589 6996 ntBASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS9D1Q9Y2B5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AL133383.2-201ENST00000622958 2336 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AC083843.2-201ENST00000568248 6253 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 RNU6-799P-201ENST00000363567 107 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 SNORA18.3-201ENST00000384122 132 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 RNY1P7-201ENST00000384743 110 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 MIR549A-201ENST00000385268 96 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SKP100-201ENST00000411258 284 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 CYP4F29P-201ENST00000420685 446 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 HMGB1P37-201ENST00000439613 609 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AL590399.6-201ENST00000446396 307 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 RN7SL447P-201ENST00000494711 245 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AC025647.1-201ENST00000517879 253 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 CYCSP39-201ENST00000565821 309 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 AP000769.2-201ENST00000602344 396 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
VPS9D1Q9Y2B5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 RNU6-173P-201ENST00000364215 104 ntBASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 RNU6-309P-201ENST00000364573 106 ntBASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 RNA5SP125-201ENST00000364843 120 ntBASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 MIR320B2-201ENST00000408479 138 ntBASIC5.34□□□□□ -1.55
VPS9D1Q9Y2B5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms