Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC108479.2-201ENST00000617314 601 ntBASIC2.05□□□□□ -2.08
TRAPPC4Q9Y296 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAPPC4Q9Y296 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAPPC4Q9Y296 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRAPPC4Q9Y296 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 SNORD56.2-201ENST00000363242 71 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU4-91P-201ENST00000364778 135 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-946P-201ENST00000383878 107 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU1-52P-201ENST00000384190 164 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 SNORD116-8-201ENST00000384365 95 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC007283.2-201ENST00000424739 197 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC093106.2-201ENST00000428212 385 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL592045.1-201ENST00000429867 352 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC119618.1-201ENST00000434191 222 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 HIGD1AP2-201ENST00000446367 280 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 MTATP6P7-201ENST00000453315 681 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 UBE2DNL-203ENST00000474922 222 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 MRPL42P6-201ENST00000486397 371 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC007182.2-201ENST00000489251 402 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU7-51P-201ENST00000516560 62 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 RNU2-46P-201ENST00000517038 113 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC060788.1-201ENST00000521318 469 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC084851.1-201ENST00000529105 249 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 SNRPGP18-201ENST00000553000 214 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 MTND3P12-201ENST00000559068 328 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC009063.1-201ENST00000563342 702 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC012414.6-201ENST00000568241 401 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 MIR3616-201ENST00000584070 92 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 BNIP3P8-201ENST00000597863 560 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL355877.2-201ENST00000603670 358 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 Z94722.1-201ENST00000604328 474 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AC091931.1-201ENST00000623488 728 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 AL160394.1-201ENST00000624765 724 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 IGHVIII-44-202ENST00000636235 289 ntBASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAPPC4Q9Y296 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 MIR449A-201ENST00000362113 91 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 U8.3-201ENST00000363321 132 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-288P-201ENST00000363690 104 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-39P-201ENST00000384344 107 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 MIR524-201ENST00000385242 87 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-750P-201ENST00000390946 107 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AF228730.1-201ENST00000397972 663 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU2-49P-201ENST00000410666 184 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU2-8P-201ENST00000410727 190 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RPS3AP3-201ENST00000411933 242 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 HMGN1P14-201ENST00000412459 517 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC096649.2-201ENST00000416186 393 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 MTCO3P30-201ENST00000426425 670 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AL591704.1-201ENST00000432574 275 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC139453.3-201ENST00000493276 369 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 RNU6-677P-201ENST00000516914 101 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 MTCYBP20-201ENST00000524239 1129 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 OSBPL9P5-201ENST00000542581 171 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AL512310.1-201ENST00000548639 172 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 NACAP3-201ENST00000552100 481 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 AC121247.2-201ENST00000604776 136 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
TRAPPC4Q9Y296 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms