Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 RNA5SP366-201ENST00000365454 123 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 RNU6-843P-201ENST00000384454 104 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 RNU6-140P-201ENST00000384566 108 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 MIR32-201ENST00000384965 70 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 MIR325-201ENST00000385260 98 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 RNU6-628P-201ENST00000410675 107 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 AC016700.2-201ENST00000446011 156 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 AL132838.2-201ENST00000492041 314 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 AP006245.1-201ENST00000522549 120 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 CYCSP40-201ENST00000575927 294 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 AC024153.1-201ENST00000603103 365 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 RMST_6.1-201ENST00000611980 203 ntBASIC4.99□□□□□ -1.61
NOD1Q9Y239 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.99□□□□□ -1.61
NOD1Q9Y239 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NOD1Q9Y239 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NOD1Q9Y239 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NOD1Q9Y239 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NOD1Q9Y239 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NOD1Q9Y239 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NOD1Q9Y239 MIR383-201ENST00000362257 73 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 RNU6-879P-201ENST00000364328 108 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 MIR23B-201ENST00000384832 97 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 RNA5SP44-201ENST00000410446 133 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AC017079.2-201ENST00000416102 485 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.98□□□□□ -1.61
NOD1Q9Y239 AC011742.1-201ENST00000431448 434 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 OR4C10P-201ENST00000434991 931 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 NDUFB4P10-201ENST00000452541 359 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 HSPE1P25-201ENST00000455484 251 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AC006026.2-201ENST00000457376 180 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AC091153.1-201ENST00000466297 402 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 RPL30P1-201ENST00000488676 339 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 RNU6-1183P-201ENST00000517054 60 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AF186190.1-201ENST00000517470 480 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AP004607.1-201ENST00000524456 203 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AP003730.1-201ENST00000524605 285 ntBASIC4.98□□□□□ -1.61
NOD1Q9Y239 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.98□□□□□ -1.61
NOD1Q9Y239 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NOD1Q9Y239 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.98□□□□□ -1.61
NOD1Q9Y239 AC007390.2-201ENST00000606229 3803 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NOD1Q9Y239 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NOD1Q9Y239 RNU6-545P-201ENST00000362681 104 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 RNU6-1286P-201ENST00000383871 107 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 SNORD63-201ENST00000384262 68 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 Y_RNA.464-201ENST00000384282 110 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NOD1Q9Y239 RPS15AP7-201ENST00000439294 405 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 HMGN2P21-201ENST00000447764 270 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 RNA5SP249-201ENST00000516127 99 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 RNU6-703P-201ENST00000516946 107 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 CBX3P4-201ENST00000538909 354 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 AC025884.1-201ENST00000556034 378 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 LINC00933-203ENST00000559812 219 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 AC113403.1-201ENST00000604910 193 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 AL023881.1-201ENST00000621088 301 ntBASIC4.97□□□□□ -1.61
NOD1Q9Y239 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NOD1Q9Y239 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NOD1Q9Y239 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.96□□□□□ -1.61
NOD1Q9Y239 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.61
NOD1Q9Y239 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
NOD1Q9Y239 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
NOD1Q9Y239 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
NOD1Q9Y239 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NOD1Q9Y239 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NOD1Q9Y239 MIR411-201ENST00000362239 96 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 SNORD115-32-201ENST00000364079 82 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 Z98749.2-208ENST00000381646 500 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 RNU6-662P-201ENST00000384253 104 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 RNU6-318P-201ENST00000384283 103 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 RNU6-378P-201ENST00000384324 107 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 RNU6-658P-201ENST00000384606 106 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 UBA52P6-201ENST00000399822 382 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.96□□□□□ -1.62
NOD1Q9Y239 EIF1AXP1-201ENST00000419267 435 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 AC092047.1-201ENST00000424997 240 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 EIF1P2-201ENST00000428233 350 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.96□□□□□ -1.62
NOD1Q9Y239 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.96□□□□□ -1.62
NOD1Q9Y239 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms