Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNA5SP131-201ENST00000365452 119 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 MIR590-201ENST00000385008 97 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 MIR1255A-201ENST00000408338 113 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 Z75741.1-201ENST00000446793 314 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 BX284632.1-201ENST00000478218 541 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 RPS29P2-201ENST00000479278 136 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 RNA5SP153-201ENST00000516498 76 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 RNU1-103P-201ENST00000516502 125 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 AP003357.1-201ENST00000604497 148 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 AL121839.2-201ENST00000565058 6943 ntBASIC5.34□□□□□ -1.55
LHX6Q9UPM6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX6Q9UPM6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LHX6Q9UPM6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 AL589743.1-201ENST00000551932 2712 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 Y_RNA.52-201ENST00000362760 96 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 Y_RNA.244-201ENST00000364484 109 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 RNA5SP211-201ENST00000365516 117 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 Y_RNA.466-201ENST00000384294 113 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 FTH1P15-201ENST00000406984 280 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 U3.36-201ENST00000408418 213 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 RN7SKP151-201ENST00000410230 316 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 AL365496.1-201ENST00000426885 215 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 SDC4P-201ENST00000453285 601 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 RN7SL352P-201ENST00000466002 277 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 RN7SL447P-201ENST00000494711 245 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 MFSD8-239ENST00000641590 2479 ntBASIC5.33□□□□□ -1.56
LHX6Q9UPM6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX6Q9UPM6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 OR9K1P-202ENST00000641111 3217 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 U3.2-201ENST00000362981 210 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 RN7SKP113-201ENST00000363891 295 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 RNA5SP479-201ENST00000364858 117 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 RNU1-43P-201ENST00000365052 165 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 MIR518C-201ENST00000384822 101 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 snoU13.20-201ENST00000459180 104 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 ENPP7P11-201ENST00000505915 627 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 ATP5EP1-201ENST00000510257 156 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 MED28P6-201ENST00000558776 231 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 AC025281.1-201ENST00000567026 265 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 AC004656.1-201ENST00000568479 4951 ntBASIC5.32□□□□□ -1.56
LHX6Q9UPM6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX6Q9UPM6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.31□□□□□ -1.56
LHX6Q9UPM6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 SNORA63.5-201ENST00000363548 123 ntBASIC5.31□□□□□ -1.56
LHX6Q9UPM6 MIR153-1-201ENST00000384914 90 ntBASIC5.31□□□□□ -1.56
LHX6Q9UPM6 RNU6-972P-201ENST00000391208 107 ntBASIC5.31□□□□□ -1.56
LHX6Q9UPM6 MIR891A-201ENST00000401237 79 ntBASIC5.31□□□□□ -1.56
LHX6Q9UPM6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX6Q9UPM6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms