Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 U4.7-201ENST00000638126 106 ntBASIC4.71□□□□□ -1.66
CNTN3Q9P232 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNTN3Q9P232 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.71□□□□□ -1.66
CNTN3Q9P232 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNTN3Q9P232 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNTN3Q9P232 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.71□□□□□ -1.66
CNTN3Q9P232 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 RNU6-428P-201ENST00000362942 107 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AL603910.2-201ENST00000407268 136 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC007560.1-201ENST00000426912 237 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 MTCO3P29-201ENST00000432119 779 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC124916.1-201ENST00000444020 547 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AL078601.1-201ENST00000444542 271 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 RNU7-87P-201ENST00000459343 62 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 RPL23AP65-201ENST00000475608 468 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC134698.5-201ENST00000519444 336 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 DEFB108E-201ENST00000524692 240 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC010186.2-204ENST00000537668 439 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC007458.1-201ENST00000542812 373 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 HMGB1P14-201ENST00000557424 591 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 IPO5P1-202ENST00000600039 287 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC010900.2-201ENST00000604508 210 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 AC004792.1-201ENST00000614523 137 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CNTN3Q9P232 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTN3Q9P232 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
CNTN3Q9P232 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 AP001148.1-201ENST00000624124 2359 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 Y_RNA.270-201ENST00000364693 104 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 Y_RNA.297-201ENST00000364950 91 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 RNU1-44P-201ENST00000384453 163 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 TOMM22P1-201ENST00000418578 312 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AC007919.1-201ENST00000429380 217 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AC104332.1-201ENST00000440471 797 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 NUTF2P3-201ENST00000448540 384 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 ANP32BP2-201ENST00000454525 545 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 SNRPGP5-201ENST00000456003 220 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AC092798.1-201ENST00000458542 409 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 RPL35AP15-201ENST00000468042 339 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 ANXA2P1-201ENST00000505539 926 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AC026784.1-201ENST00000507986 352 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 SNORA31.8-201ENST00000516327 108 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 RNU6-1338P-201ENST00000516328 91 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 RNU2-58P-201ENST00000516403 183 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 RNU6-572P-201ENST00000516724 80 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AP003730.1-201ENST00000524605 285 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 CYCSP29-201ENST00000533731 318 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 ARF4P1-201ENST00000605447 541 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 AL450472.1-202ENST00000637286 180 ntBASIC4.69□□□□□ -1.66
CNTN3Q9P232 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CNTN3Q9P232 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTN3Q9P232 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTN3Q9P232 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTN3Q9P232 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTN3Q9P232 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTN3Q9P232 RNU1-94P-201ENST00000362627 173 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 Y_RNA.65-201ENST00000362846 100 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 Y_RNA.123-201ENST00000363338 102 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 RNA5SP175-201ENST00000364275 119 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 BTF3L4P2-201ENST00000392798 346 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 RNU2-68P-201ENST00000410878 191 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 AL157831.1-201ENST00000426134 473 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 FTH1P6-201ENST00000430768 320 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 VDAC1P3-201ENST00000434069 851 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 AC105137.1-201ENST00000484355 562 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNTN3Q9P232 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
CNTN3Q9P232 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.68□□□□□ -1.66
CNTN3Q9P232 AC136932.1-201ENST00000574771 208 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.68□□□□□ -1.66
CNTN3Q9P232 AC090132.2-201ENST00000615881 347 ntBASIC4.68□□□□□ -1.66
CNTN3Q9P232 MIR7154-201ENST00000620673 73 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms