Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL20A1Q9P218 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 CBX3P1-201ENST00000325243 554 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 MIR412-201ENST00000362142 91 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 RNU6-1179P-201ENST00000384667 107 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 RNA5SP219-201ENST00000390940 113 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 EIF4E2P1-201ENST00000393781 255 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 UBA52P6-201ENST00000399822 382 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AL159169.1-201ENST00000421119 127 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 RPL35AP12-201ENST00000425362 338 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 RNU7-170P-201ENST00000459303 61 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 RNU6-1314P-201ENST00000517139 104 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 RPL7P20-201ENST00000520308 745 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 EIF4BP1-201ENST00000554881 351 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AMZ2P1-203ENST00000565833 850 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 AC012119.1-201ENST00000603184 222 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AL137843.1-201ENST00000605078 385 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 AL033523.1-201ENST00000605153 153 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL20A1Q9P218 AC022306.2-201ENST00000617563 647 ntBASIC3.59□□□□□ -1.83
COL20A1Q9P218 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.59□□□□□ -1.83
COL20A1Q9P218 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
COL20A1Q9P218 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL20A1Q9P218 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 SNORA44-201ENST00000384584 132 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 MIR578-201ENST00000384828 96 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 USP9YP20-201ENST00000419224 558 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL360271.2-201ENST00000447710 161 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 AP001486.1-201ENST00000463339 476 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 DYNLL1P5-201ENST00000467158 270 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 RPL21P93-201ENST00000480465 489 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL049873.1-201ENST00000480540 376 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 RN7SKP256-201ENST00000517201 314 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 CYCSP27-201ENST00000527643 293 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC087241.2-201ENST00000535801 324 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC090115.3-201ENST00000553218 849 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL451007.1-201ENST00000595491 289 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 VN1R80P-201ENST00000597126 338 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC135507.2-201ENST00000612443 309 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL138880.2-201ENST00000616214 239 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC068831.7-201ENST00000616954 363 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AL136221.1-201ENST00000621449 509 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 MTND4P12-201ENST00000498999 1377 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 AC066616.2-201ENST00000559334 1481 ntBASIC3.58□□□□□ -1.84
COL20A1Q9P218 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL20A1Q9P218 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL20A1Q9P218 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL20A1Q9P218 SNORD6-201ENST00000365444 73 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL20A1Q9P218 SNORA32.2-201ENST00000384049 122 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 MIR888-201ENST00000401186 77 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 RPS4XP7-201ENST00000406274 780 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 RPLP0P7-201ENST00000416050 667 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AL353621.1-201ENST00000418219 243 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AL645937.1-202ENST00000421799 937 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 MTCO3P46-201ENST00000425787 232 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL20A1Q9P218 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 BRK1P2-201ENST00000442875 223 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC022493.1-201ENST00000492984 337 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 TRBVA-201ENST00000498804 316 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 HMGN1P12-201ENST00000499125 195 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC008628.2-201ENST00000502605 298 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC009901.1-201ENST00000506703 541 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 FAM206BP-201ENST00000510179 541 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC112206.3-201ENST00000514578 389 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AP000763.2-201ENST00000540641 163 ntBASIC3.57□□□□□ -1.84
COL20A1Q9P218 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.57□□□□□ -1.84
COL20A1Q9P218 AC005183.1-201ENST00000603687 1979 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms