Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 BTF3P15-201ENST00000455606 336 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC023194.1-201ENST00000493084 308 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC026436.1-201ENST00000510537 270 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RNU6-123P-201ENST00000516163 102 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC090572.1-201ENST00000519251 160 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 GTF3AP2-201ENST00000557014 266 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 LINC00933-203ENST00000559812 219 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC137800.2-201ENST00000574375 120 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AL158032.1-201ENST00000605401 106 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AL121992.2-201ENST00000606262 256 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC126118.1-201ENST00000607744 628 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 uc_338.14-201ENST00000613162 166 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AC138649.3-201ENST00000622154 254 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 AL157786.1-207ENST00000627771 695 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 MIR7157-201ENST00000635801 60 ntBASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCL28Q9NRJ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MIRLET7G-201ENST00000362280 84 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RNU6-179P-201ENST00000363350 107 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RNU6-61P-201ENST00000365528 109 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 OR5H15-201ENST00000383696 930 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RNU6-748P-201ENST00000384648 107 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MIR518C-201ENST00000384822 101 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 SNORA48.2-201ENST00000390926 124 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AL359511.1-201ENST00000402970 211 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MTND3P17-201ENST00000416968 344 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AL353706.1-201ENST00000436728 494 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC004924.1-201ENST00000480160 781 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC116655.1-201ENST00000508324 901 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC002456.2-201ENST00000509356 380 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 SNORA18.6-201ENST00000516792 115 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RNU6-410P-201ENST00000517006 107 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AP003072.2-201ENST00000527756 676 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AP000889.2-201ENST00000532684 490 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MIR3199-1-201ENST00000582434 88 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 Z99497.2-201ENST00000603634 310 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC064872.1-201ENST00000604823 1072 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RPL23AP88-201ENST00000605759 454 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 OR2AS2P-201ENST00000606902 342 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC073114.1-201ENST00000612027 490 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC008147.4-201ENST00000617570 1204 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 AC097520.1-201ENST00000624435 385 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 MTND4P27-201ENST00000450813 1354 ntBASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL28Q9NRJ3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 RNU1-138P-201ENST00000384093 164 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 RN7SKP142-201ENST00000411236 328 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 RNU6-387P-201ENST00000411331 105 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 RPL31P35-201ENST00000431058 377 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MTATP6P16-201ENST00000434543 526 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC079781.2-201ENST00000446424 169 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL583843.1-201ENST00000456070 346 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AP001324.2-201ENST00000461163 319 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC126389.1-201ENST00000477436 290 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms