Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 RPS3AP44-201ENST00000425466 790 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 ZNF863P-201ENST00000426746 417 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL513043.1-201ENST00000439124 535 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 MTND1P18-201ENST00000448191 573 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 FABP5P15-201ENST00000453566 214 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL356010.1-201ENST00000456364 102 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC139453.3-201ENST00000493276 369 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC090136.1-201ENST00000520009 240 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 RANP3-201ENST00000530970 276 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC025165.5-201ENST00000602802 578 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC093788.1-201ENST00000609356 927 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AL359547.2-201ENST00000615810 418 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD1Q9GZZ0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC233263.6-201ENST00000631132 1963 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC138915.1-201ENST00000565427 1685 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-996P-201ENST00000365438 107 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-550P-201ENST00000391057 101 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNA5SP252-201ENST00000391131 119 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC099548.1-201ENST00000421443 426 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 TIMM9P3-201ENST00000428659 274 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC006946.1-201ENST00000429106 328 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RPL36AP53-201ENST00000432891 316 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 SNRPEP9-201ENST00000436794 238 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC010099.1-201ENST00000455434 375 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 snoU13.28-201ENST00000459235 104 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AL121769.1-201ENST00000469473 401 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC109927.2-201ENST00000506416 303 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC098591.2-201ENST00000510152 315 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC011352.1-201ENST00000512300 793 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 SNORA40.12-201ENST00000516329 111 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-143P-201ENST00000516942 93 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-685P-201ENST00000517088 95 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 MTND1P5-201ENST00000517906 940 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AP000867.2-201ENST00000532468 320 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 OR5BN1P-201ENST00000532955 829 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 DNAJC8P1-201ENST00000554535 372 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 ZNF519P2-201ENST00000557032 169 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC136619.2-201ENST00000563361 631 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AMZ2P1-203ENST00000565833 850 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC025678.1-201ENST00000567861 338 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC068135.2-201ENST00000569293 1028 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 MIR4703-201ENST00000577728 79 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC024153.1-201ENST00000603103 365 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC107304.1-201ENST00000604229 296 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 FTX_3.1-201ENST00000610451 147 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC006111.3-201ENST00000622137 383 ntBASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXD1Q9GZZ0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 AC006020.1-201ENST00000420179 1854 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 ELF2P3-201ENST00000445099 1506 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 MIR208A-201ENST00000362287 71 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-1322P-201ENST00000364309 107 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 CD24P4-201ENST00000382840 243 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 SNORA48.5-201ENST00000391143 135 ntBASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD1Q9GZZ0 RNU6-648P-201ENST00000410190 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms