Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RNU1-65P-201ENST00000363919 148 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 UBBP2-201ENST00000376781 231 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RNU6-47P-201ENST00000383866 107 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RNU6-793P-201ENST00000384233 104 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RNU6-1081P-201ENST00000384537 107 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MIR544A-201ENST00000384855 91 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RPS3AP2-201ENST00000407190 754 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 BMS1P22-201ENST00000414726 313 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 OOSP1P1-201ENST00000423265 274 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 SRSF1P1-201ENST00000424058 520 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL591419.1-201ENST00000427423 339 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC023141.3-201ENST00000436698 278 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC245291.3-201ENST00000443400 292 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 BTF3P6-201ENST00000448054 499 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 NDUFS5P3-201ENST00000450668 321 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AP000705.1-201ENST00000454567 350 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 TREML3P-201ENST00000457327 501 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RN7SL393P-201ENST00000463588 296 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RPS23P7-201ENST00000466210 444 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC091021.1-201ENST00000468051 388 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RPS26P39-201ENST00000469206 341 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC098847.1-201ENST00000473094 348 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC007998.1-201ENST00000474156 672 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 RPS29P26-201ENST00000477483 171 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL049830.2-201ENST00000480072 201 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC114324.2-202ENST00000503812 134 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 ZNF519P4-201ENST00000514008 125 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC024940.3-201ENST00000538551 316 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 UBL5P4-201ENST00000562584 236 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MIR548AI-201ENST00000579940 88 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 KLKP1-201ENST00000595979 403 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL591034.3-201ENST00000605511 685 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL359198.2-201ENST00000611836 194 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MIR6762-201ENST00000613340 86 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL138880.2-201ENST00000616214 239 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC004825.2-201ENST00000616634 455 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL136228.1-201ENST00000622221 319 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC048347.1-201ENST00000624621 427 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 CR381572.2-201ENST00000624852 397 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AC010325.3-201ENST00000641084 394 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 AL133383.2-201ENST00000622958 2336 ntBASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
LCE3DQ9BYE3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.39□□□□□ -2.19
LCE3DQ9BYE3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LCE3DQ9BYE3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms