Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC128713.1-201ENST00000471495 306 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 RPS15AP34-201ENST00000487776 387 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AL049874.1-201ENST00000489560 388 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 RNU1-95P-201ENST00000516357 160 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 RNU6-635P-201ENST00000516651 102 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 RNU1-128P-201ENST00000516704 160 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AP002404.1-201ENST00000532005 451 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
TIMP4Q99727 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.43□□□□□ -1.86
TIMP4Q99727 AC104695.3-201ENST00000604052 296 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AC110741.2-201ENST00000605278 268 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 AC015967.1-201ENST00000619893 476 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 U4.1-201ENST00000620349 87 ntBASIC3.43□□□□□ -1.86
TIMP4Q99727 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TIMP4Q99727 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.43□□□□□ -1.86
TIMP4Q99727 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.43□□□□□ -1.86
TIMP4Q99727 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TIMP4Q99727 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 RNU5A-1-201ENST00000362698 116 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 SNORA73.2-201ENST00000364946 201 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 RNA5SP167-201ENST00000365461 116 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 RNU6-1329P-201ENST00000365664 107 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 Y_RNA.455-201ENST00000384230 98 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 RNU6-842P-201ENST00000384269 107 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 RNU6-907P-201ENST00000390924 102 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC243428.1-201ENST00000421099 264 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 UBE2V1P4-201ENST00000425374 344 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.42□□□□□ -1.86
TIMP4Q99727 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.42□□□□□ -1.86
TIMP4Q99727 AL592045.1-201ENST00000429867 352 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AL645568.3-201ENST00000433683 316 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.42□□□□□ -1.86
TIMP4Q99727 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.42□□□□□ -1.86
TIMP4Q99727 AL360271.2-201ENST00000447710 161 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC068781.1-201ENST00000488231 618 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 UBE2CP3-201ENST00000502715 450 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.42□□□□□ -1.86
TIMP4Q99727 RN7SKP83-201ENST00000516512 178 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC069113.1-201ENST00000517763 267 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.42□□□□□ -1.86
TIMP4Q99727 AL161670.1-201ENST00000554348 137 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 OR1M4P-201ENST00000589199 287 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 SNORD39.4-201ENST00000620099 78 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 MIR6075-201ENST00000620782 95 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AL512643.1-201ENST00000635735 524 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 Z99571.1-201ENST00000636677 394 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC091812.1-201ENST00000432235 1948 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TIMP4Q99727 AC009812.4-201ENST00000569134 1805 ntBASIC3.42□□□□□ -1.86
TIMP4Q99727 AC005592.1-201ENST00000566527 1640 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AC010733.2-201ENST00000589496 5702 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 UBE2L2-201ENST00000254302 429 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNU6-512P-201ENST00000364438 103 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNU6-450P-201ENST00000364654 107 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNU6-1318P-201ENST00000365389 103 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNU6-629P-201ENST00000384061 103 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RNU6-1179P-201ENST00000384667 107 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TIMP4Q99727 Y_RNA.645-201ENST00000391229 102 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RPL21P17-201ENST00000397467 475 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AL445529.1-201ENST00000398713 389 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AC096664.2-201ENST00000411843 406 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.41□□□□□ -1.86
TIMP4Q99727 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.41□□□□□ -1.86
TIMP4Q99727 SNORA71B-202ENST00000439232 272 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 PCMTD1P1-201ENST00000455560 355 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RPL9P32-201ENST00000464118 620 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AC008571.1-201ENST00000467232 300 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 RPL31P60-201ENST00000478450 367 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.41□□□□□ -1.86
TIMP4Q99727 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.41□□□□□ -1.86
TIMP4Q99727 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.41□□□□□ -1.86
TIMP4Q99727 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms