Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RPL39P29-201ENST00000447779 157 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 AC107027.2-201ENST00000512197 115 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.29□□□□□ -1.56
PHOX2BQ99453 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHOX2BQ99453 AC100821.1-201ENST00000523153 2479 ntBASIC5.29□□□□□ -1.56
PHOX2BQ99453 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHOX2BQ99453 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHOX2BQ99453 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHOX2BQ99453 ELOCP21-201ENST00000412558 336 ntBASIC5.28□□□□□ -1.56
PHOX2BQ99453 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 GNG5P5-201ENST00000420444 220 ntBASIC5.28□□□□□ -1.56
PHOX2BQ99453 RPL7AP25-201ENST00000423357 805 ntBASIC5.28□□□□□ -1.56
PHOX2BQ99453 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 FTH1P11-201ENST00000517577 551 ntBASIC5.28□□□□□ -1.56
PHOX2BQ99453 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 AL133481.2-203ENST00000607558 139 ntBASIC5.28□□□□□ -1.56
PHOX2BQ99453 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHOX2BQ99453 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PHOX2BQ99453 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHOX2BQ99453 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC002543.1-201ENST00000299783 1954 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 Y_RNA.127-201ENST00000363386 109 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 RNU6-884P-201ENST00000363889 107 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 Y_RNA.333-201ENST00000365274 102 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 MIR105-1-201ENST00000385222 81 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 RN7SKP100-201ENST00000411258 284 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AP000705.1-201ENST00000454567 350 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 RNU6-919P-201ENST00000516731 104 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC100767.1-201ENST00000528178 123 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 CYP4A27P-201ENST00000567218 190 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 MIR4744-201ENST00000581563 82 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AL021997.2-201ENST00000615674 271 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AP001273.1-201ENST00000624493 3152 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 AC092376.2-201ENST00000622621 4116 ntBASIC5.27□□□□□ -1.57
PHOX2BQ99453 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.27□□□□□ -1.57
PHOX2BQ99453 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHOX2BQ99453 OR56B2P-202ENST00000641377 2453 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHOX2BQ99453 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHOX2BQ99453 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 RNA5SP326-201ENST00000363209 110 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 RNA5SP28-201ENST00000363841 119 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 RNA5SP428-201ENST00000365129 132 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 SNORA18.3-201ENST00000384122 132 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 MIR493-201ENST00000385254 89 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL357075.1-201ENST00000404107 726 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL009179.1-201ENST00000406085 265 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 RNA5SP113-201ENST00000410486 84 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AC019205.3-201ENST00000424573 156 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 RPL7AP49-201ENST00000429522 581 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL591438.1-201ENST00000433508 581 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 MIR3136-201ENST00000583498 78 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL451007.1-201ENST00000595491 289 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL591034.3-201ENST00000605511 685 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 MIR6716-201ENST00000613413 80 ntBASIC5.26□□□□□ -1.57
PHOX2BQ99453 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PHOX2BQ99453 AL137141.1-201ENST00000624622 4836 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms