Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 COX6B1P7-201ENST00000430845 235 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 Z82210.1-201ENST00000440037 231 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 AC087588.1-201ENST00000462203 316 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 RPL21P126-201ENST00000470049 478 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 RN7SKP164-201ENST00000516138 266 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-927P-201ENST00000516199 100 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 TRAV28-201ENST00000557548 323 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 AC106785.1-201ENST00000565935 262 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 MIR3939-201ENST00000582614 106 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 U7.2-201ENST00000607576 63 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 AC015914.2-201ENST00000618167 288 ntBASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX2-3Q8TAU0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-513P-201ENST00000516104 104 ntBASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AL391261.3-201ENST00000557194 520 ntBASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AL354798.1-201ENST00000622505 329 ntBASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 AL596275.2-206ENST00000641957 626 ntBASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX2-3Q8TAU0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 UBE2L2-201ENST00000254302 429 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-428P-201ENST00000362942 107 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU4-80P-201ENST00000363200 141 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 Y_RNA.116-201ENST00000363292 103 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 SNORD14B-201ENST00000364533 90 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-281P-201ENST00000384212 103 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-1145P-201ENST00000384246 107 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-1248P-201ENST00000391096 64 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 UBA52P6-201ENST00000399822 382 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AC007738.1-201ENST00000413892 348 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 BTF3P11-201ENST00000426582 477 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AL121594.1-201ENST00000475906 575 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNA5SP165-201ENST00000517142 115 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-840P-201ENST00000517275 65 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AC100767.1-201ENST00000528178 123 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 MIR4782-201ENST00000577987 79 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AC107294.1-201ENST00000609524 467 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 AC090617.7-201ENST00000623952 126 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 U4.7-201ENST00000638126 106 ntBASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NKX2-3Q8TAU0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC090971.4-201ENST00000560291 1800 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 RNA5SP509-201ENST00000364577 119 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 SNORA70C-201ENST00000384538 135 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 SNORA84-201ENST00000459229 133 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC011276.1-201ENST00000469688 323 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 RPL36AP41-201ENST00000493820 306 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-377P-201ENST00000515965 102 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 MTND5P34-201ENST00000568888 325 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC005296.1-201ENST00000616145 209 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 AC009812.4-201ENST00000569134 1805 ntBASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-3Q8TAU0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms