Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HMGB1P40-201ENST00000525121 540 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 MIR8069-1-201ENST00000616627 86 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 MIR8069-2-201ENST00000621412 86 ntBASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DEPDC4Q8N2C3 AL109809.4-201ENST00000603520 2185 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 MIR410-201ENST00000362222 80 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-858P-201ENST00000362436 107 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-774P-201ENST00000363238 107 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-1020P-201ENST00000363684 107 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RN7SKP280-201ENST00000364196 304 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 SNORA19-201ENST00000384737 128 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNU1-77P-201ENST00000390868 162 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AL645927.1-201ENST00000396783 406 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 HLFP1-201ENST00000402375 499 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNU2-61P-201ENST00000411069 191 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC007395.1-201ENST00000451333 677 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RPL26P9-201ENST00000457466 433 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RN7SL172P-201ENST00000460535 303 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 SNORA40.9-201ENST00000515895 93 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RNA5SP249-201ENST00000516127 99 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.683-201ENST00000516508 93 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 RPL23AP53-201ENST00000521854 457 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 UBL5P4-201ENST00000562584 236 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 MTND6P33-201ENST00000571794 183 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC024940.4-201ENST00000605507 246 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AL049539.1-201ENST00000611964 459 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 AC110491.1-201ENST00000562191 2010 ntBASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DEPDC4Q8N2C3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 SNORA67-201ENST00000384423 137 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.590-201ENST00000410140 107 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 RPL23AP36-201ENST00000413895 458 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 COX6CP10-201ENST00000416832 224 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 COX6CP13-201ENST00000428703 226 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC244670.1-201ENST00000436879 112 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 RPS21P4-201ENST00000487122 248 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 RPL21P7-201ENST00000557463 483 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 MIR3133-201ENST00000583157 78 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC010620.2-201ENST00000600135 313 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC011921.3-201ENST00000605540 361 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC000068.2-201ENST00000608816 460 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AL110115.1-201ENST00000614396 364 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 AL079305.1-201ENST00000623159 3008 ntBASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
DEPDC4Q8N2C3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 ADAM3A-203ENST00000461344 2157 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 RNA5SP234-201ENST00000363916 119 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-1175P-201ENST00000365200 107 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms