Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AC079780.1-201ENST00000428259 207 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 CKS1BP5-201ENST00000434172 273 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 RPS15AP5-201ENST00000436276 388 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-1211P-201ENST00000459179 105 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AC020890.1-201ENST00000491837 504 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 SNORA25.12-201ENST00000516202 82 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 RNA5SP165-201ENST00000517142 115 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 CYCSP40-201ENST00000575927 294 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AL121932.1-201ENST00000605542 214 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 AC008873.1-201ENST00000625051 138 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.84□□□□□ -1.64
LYSMD3Q7Z3D4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LYSMD3Q7Z3D4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
LYSMD3Q7Z3D4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
LYSMD3Q7Z3D4 AC092593.1-201ENST00000515413 1815 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 FTLP6-201ENST00000355274 422 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RNU4-17P-201ENST00000365598 141 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 SNORA20-201ENST00000384662 132 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP44-201ENST00000410446 133 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 FAR2P2-201ENST00000413041 594 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC114755.2-201ENST00000413520 361 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 Z85995.1-201ENST00000415547 335 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RPL30P13-201ENST00000418873 348 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RPL17P36-201ENST00000420302 549 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 TBCAP1-201ENST00000436520 327 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SL860P-201ENST00000473738 223 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-966P-201ENST00000516479 104 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP290-201ENST00000517133 127 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC093249.4-201ENST00000564755 259 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 MIR4330-201ENST00000579077 105 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 MIR3145-201ENST00000580727 82 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 MIR4737-201ENST00000583979 81 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC004825.2-201ENST00000616634 455 ntBASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.83□□□□□ -1.64
LYSMD3Q7Z3D4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 TLK1P1-201ENST00000456760 2440 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-275P-201ENST00000364910 107 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 SNORA29-201ENST00000384183 140 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-80P-201ENST00000384195 107 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 U8.10-201ENST00000384260 133 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-72P-201ENST00000384285 79 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-159P-201ENST00000391080 106 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP113-201ENST00000410486 84 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RPL7AP25-201ENST00000423357 805 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 BTF3P11-201ENST00000426582 477 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 ANP32BP2-201ENST00000454525 545 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RPS20P22-201ENST00000473700 357 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 PDCD5P2-201ENST00000507570 312 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC091874.1-201ENST00000511402 339 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU4-57P-201ENST00000515980 135 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 RNU7-121P-201ENST00000516604 62 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 DEFB131C-201ENST00000528817 165 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms