Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RPS29P26-201ENST00000477483 171 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 RPL9P33-201ENST00000484311 566 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 EIF4EP3-201ENST00000498782 656 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AF213884.2-201ENST00000510417 903 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 SCARNA3-201ENST00000517097 143 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC009902.1-201ENST00000519351 183 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC234778.2-201ENST00000566241 354 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 MIR4325-201ENST00000583049 90 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 AC068790.6-201ENST00000602558 258 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 HULC.1-201ENST00000612720 240 ntBASIC2.58□□□□□ -2
NHLRC1Q6VVB1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.58□□□□□ -2
NHLRC1Q6VVB1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RNU6-192P-201ENST00000391253 100 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL078595.1-201ENST00000404458 226 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL160275.3-201ENST00000423876 471 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 HMGB1P30-201ENST00000492455 606 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC116655.1-201ENST00000508324 901 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC023141.11-201ENST00000508864 202 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RNU6-123P-201ENST00000516163 102 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 BTF3P12-201ENST00000519620 469 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AP003072.2-201ENST00000527756 676 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC012414.6-201ENST00000568241 401 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC005261.5-201ENST00000596280 355 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC008121.1-201ENST00000603244 268 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC080078.2-201ENST00000603766 501 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC090578.1-201ENST00000604955 591 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RN7SKP299-201ENST00000606679 301 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 RNU6-91P-201ENST00000607774 107 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC010678.1-201ENST00000614118 713 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 uc_338.11-201ENST00000619132 160 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC009509.4-201ENST00000619202 509 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AC025034.2-201ENST00000623264 286 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 AL157786.1-207ENST00000627771 695 ntBASIC2.57□□□□□ -2
NHLRC1Q6VVB1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
NHLRC1Q6VVB1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 RNU6-169P-201ENST00000365336 107 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 RNU6-108P-201ENST00000365558 107 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 SNORA24.1-201ENST00000384401 135 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 CISD1P1-201ENST00000393907 327 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AL138885.1-201ENST00000405921 675 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 C1DP2-201ENST00000418167 426 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 PIGFP2-201ENST00000421400 651 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 BX276092.3-201ENST00000424182 230 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AL627311.1-201ENST00000431514 115 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 RPS15AP9-201ENST00000439856 381 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 MTCO1P19-201ENST00000443487 500 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC004924.1-201ENST00000480160 781 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC011825.1-201ENST00000484967 388 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 MTAPP1-201ENST00000489154 819 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC010424.1-201ENST00000506336 297 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC091965.2-201ENST00000512324 613 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 Y_RNA.695-201ENST00000516715 107 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 RN7SKP272-201ENST00000516988 232 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.56□□□□□ -2
NHLRC1Q6VVB1 AC027807.1-201ENST00000559921 996 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
NHLRC1Q6VVB1 MTCO3P13-201ENST00000577757 781 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms