Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR1245B-201ENST00000636115 69 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AF127577.6-201ENST00000623352 2191 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.21□□□□□ -1.57
CTC1Q2NKJ3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 LINC01109-201ENST00000603837 3081 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AL590240.1-201ENST00000334118 313 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP447-201ENST00000363749 119 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RNY1P11-201ENST00000363759 113 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 MIR23A-201ENST00000385245 73 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RNU6-1001P-201ENST00000411265 100 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AL160275.2-201ENST00000412010 394 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RPL7AP61-201ENST00000443410 636 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AL031737.1-201ENST00000450125 223 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP103-201ENST00000459503 118 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AC010618.1-201ENST00000469924 477 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RPL23AP75-201ENST00000491601 451 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 RPL36AP41-201ENST00000493820 306 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 MIR5695-201ENST00000579717 85 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 AC008121.1-201ENST00000603244 268 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 SCARNA4-201ENST00000629045 128 ntBASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CTC1Q2NKJ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP197-201ENST00000363357 119 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 RNU6-915P-201ENST00000364943 103 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 SNORA2.3-201ENST00000383920 135 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AL591034.1-201ENST00000407447 340 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AC096638.1-201ENST00000444678 216 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 RN7SKP164-201ENST00000516138 266 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 RNU6-1315P-201ENST00000517187 99 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AL139395.1-201ENST00000603662 160 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AL450472.3-201ENST00000615578 367 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AL354798.1-201ENST00000622505 329 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 U6.95-201ENST00000636931 70 ntBASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CTC1Q2NKJ3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RN7SKP224-201ENST00000364140 325 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SNORD116-21-201ENST00000384507 92 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RNU6-837P-201ENST00000391056 108 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SNORA48.7-201ENST00000391302 135 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC114755.2-201ENST00000413520 361 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC016831.4-201ENST00000438302 307 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AL353705.4-201ENST00000449661 238 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AL591473.1-201ENST00000464297 313 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC026402.1-201ENST00000513642 170 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RNU6-1095P-201ENST00000516148 108 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RNU6-840P-201ENST00000517275 65 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC005476.1-201ENST00000554427 397 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AL157871.3-201ENST00000557231 293 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC022441.3-201ENST00000605737 136 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC011944.2-201ENST00000624440 683 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms