Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 SNORD62.1-201ENST00000362541 86 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 XGY1-201ENST00000381172 446 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 RNU6-701P-201ENST00000384059 107 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 MIR27B-201ENST00000385129 97 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 SNRPEP10-201ENST00000420249 274 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 GTF2IP20-201ENST00000431663 360 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AL353572.1-201ENST00000442490 417 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 RNU7-63P-201ENST00000459054 62 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 GMFBP1-201ENST00000467831 427 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC006512.1-201ENST00000468816 291 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AL163973.1-201ENST00000484753 577 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 HMGB3P15-201ENST00000507326 574 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 RN7SKP258-201ENST00000517151 304 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 RNU6-840P-201ENST00000517275 65 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 MIR3921-201ENST00000577308 85 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 uc_338.11-201ENST00000619132 160 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 YWHAEP7-203ENST00000622054 312 ntBASIC3.14□□□□□ -1.91
PDS5AQ29RF7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.14□□□□□ -1.91
PDS5AQ29RF7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNY3P3-201ENST00000363816 102 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNU6-996P-201ENST00000365438 107 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNU6-877P-201ENST00000383868 107 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNU6-946P-201ENST00000383878 107 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SNORA24.1-201ENST00000384401 135 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNU6-14P-201ENST00000384630 106 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 MIR518C-201ENST00000384822 101 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AL591416.1-201ENST00000404015 867 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RN7SKP140-201ENST00000411196 284 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC093106.2-201ENST00000428212 385 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SEPT14P3-201ENST00000439401 183 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AL732372.2-207ENST00000445840 183 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 DPPA3P1-201ENST00000448050 469 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SEPT14P2-201ENST00000453405 183 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 CACYBPP2-201ENST00000453625 678 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RPL23AP11-201ENST00000475260 469 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC069439.1-201ENST00000494739 167 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SEPT14P4-201ENST00000513445 186 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 SNORA31.3-201ENST00000516029 96 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNA5SP320-201ENST00000516263 124 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RNU6-358P-201ENST00000516564 75 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 NRON-201ENST00000517270 370 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 FO082796.1-201ENST00000523795 183 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC118273.2-201ENST00000532092 465 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 RPL23AP84-201ENST00000571193 464 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC005951.2-201ENST00000576282 495 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AL365204.3-201ENST00000612448 685 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
PDS5AQ29RF7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.13□□□□□ -1.91
PDS5AQ29RF7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AL139276.1-201ENST00000311910 1001 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RNU5A-1-201ENST00000362698 116 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RNU6-179P-201ENST00000363350 107 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 SNORA62.1-201ENST00000364287 154 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RNU6-61P-201ENST00000365528 109 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 RNY3P14-201ENST00000384309 102 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AL445529.1-201ENST00000398713 389 ntBASIC3.12□□□□□ -1.91
PDS5AQ29RF7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.12□□□□□ -1.91
PDS5AQ29RF7 HMGB1P31-201ENST00000437242 427 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms