Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 MTCO2P21-201ENST00000419780 677 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AL354692.1-201ENST00000423044 315 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.97□□□□□ -2.09
EIF3EP60228 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.97□□□□□ -2.09
EIF3EP60228 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.97□□□□□ -2.09
EIF3EP60228 MTND1P32-201ENST00000433043 938 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AL353706.1-201ENST00000436728 494 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC004854.1-201ENST00000440356 349 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 RPL39P36-201ENST00000490784 156 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 MTND3P3-201ENST00000505004 126 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.97□□□□□ -2.09
EIF3EP60228 HSPE1P23-201ENST00000509838 286 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.97□□□□□ -2.09
EIF3EP60228 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
EIF3EP60228 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 ANP32BP3-201ENST00000559213 706 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 LINC00933-203ENST00000559812 219 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 AL031274.2-201ENST00000599419 203 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC007363.1-201ENST00000604736 620 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC013244.3-201ENST00000605614 388 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
EIF3EP60228 AL139418.1-201ENST00000613613 177 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.97□□□□□ -2.09
EIF3EP60228 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
EIF3EP60228 MIR6134-201ENST00000617606 109 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 AC022306.3-201ENST00000619930 550 ntBASIC1.97□□□□□ -2.09
EIF3EP60228 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
EIF3EP60228 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.97□□□□□ -2.09
EIF3EP60228 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.96□□□□□ -2.09
EIF3EP60228 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.96□□□□□ -2.1
EIF3EP60228 ZNF702P-202ENST00000434269 1966 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 MIR95-201ENST00000385072 81 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 MIR561-201ENST00000385216 97 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 RNU6-817P-201ENST00000391083 104 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 AL160275.3-201ENST00000423876 471 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 AL592045.1-201ENST00000429867 352 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.96□□□□□ -2.1
EIF3EP60228 NEFMP1-201ENST00000443423 1006 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 RNU6-581P-201ENST00000516214 105 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC009902.1-201ENST00000519351 183 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC084851.1-201ENST00000529105 249 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
EIF3EP60228 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF3EP60228 AL356432.3-201ENST00000568952 465 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
EIF3EP60228 MIR4307-201ENST00000582802 84 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC104763.2-201ENST00000604179 382 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC090970.3-201ENST00000612566 866 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC098657.3-201ENST00000620434 263 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
EIF3EP60228 AC006927.4-201ENST00000639187 543 ntBASIC1.96□□□□□ -2.1
EIF3EP60228 Y_RNA.111-201ENST00000363248 100 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.95□□□□□ -2.1
EIF3EP60228 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 MTCO2P8-201ENST00000412213 658 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
EIF3EP60228 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.95□□□□□ -2.1
EIF3EP60228 FABP5P13-201ENST00000452144 328 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AC092001.1-201ENST00000453012 261 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 RPL38P4-201ENST00000502376 214 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AC104685.1-201ENST00000502445 371 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 ANXA2P1-201ENST00000505539 926 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
EIF3EP60228 AC079598.5-201ENST00000547460 117 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.95□□□□□ -2.1
EIF3EP60228 AL049838.1-201ENST00000563647 981 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.95□□□□□ -2.1
EIF3EP60228 KC877982.1-201ENST00000602313 470 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 RNU6-91P-201ENST00000607774 107 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AC009974.1-201ENST00000608881 455 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AL391813.2-201ENST00000609113 322 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 AC008121.3-201ENST00000618726 433 ntBASIC1.95□□□□□ -2.1
EIF3EP60228 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
EIF3EP60228 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.94□□□□□ -2.1
EIF3EP60228 Y_RNA.46-201ENST00000362695 102 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 RNY4P24-201ENST00000362735 96 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 AC106883.1-201ENST00000418805 562 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 RPS15AP9-201ENST00000439856 381 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 snoU109.1-201ENST00000459339 135 ntBASIC1.94□□□□□ -2.1
EIF3EP60228 AC091951.3-201ENST00000504093 246 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms