Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU6-1314P-201ENST00000517139 104 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD12P35452 AC107953.1-201ENST00000522216 297 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD12P35452 AL118558.2-201ENST00000556294 238 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD12P35452 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD12P35452 AC022893.3-201ENST00000607665 437 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 AC107294.3-201ENST00000609211 526 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 AP003122.5-201ENST00000527668 3766 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 MTND4P29-201ENST00000503122 1372 ntBASIC3.47□□□□□ -1.85
HOXD12P35452 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD12P35452 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD12P35452 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.46□□□□□ -1.85
HOXD12P35452 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
HOXD12P35452 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.46□□□□□ -1.85
HOXD12P35452 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD12P35452 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
HOXD12P35452 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD12P35452 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD12P35452 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD12P35452 Y_RNA.378-201ENST00000365652 113 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 RNU6-510P-201ENST00000391239 108 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AL139039.1-201ENST00000401900 692 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 RNU6-1148P-201ENST00000410992 104 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 RPS12P24-201ENST00000412619 387 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD12P35452 BTF3L4P3-201ENST00000418879 476 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 ARL5AP1-201ENST00000418991 388 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXD12P35452 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD12P35452 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD12P35452 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD12P35452 SCARNA18-201ENST00000459004 134 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD12P35452 MTCO3P9-201ENST00000506989 781 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 CCDC34P1-201ENST00000507441 517 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD12P35452 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD12P35452 RNU6-927P-201ENST00000516199 100 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXD12P35452 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD12P35452 PSMA3P-201ENST00000555485 635 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXD12P35452 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD12P35452 C8orf59P2-201ENST00000603441 271 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AC034102.8-201ENST00000615146 484 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD12P35452 AC099654.7-201ENST00000635788 2127 ntBASIC3.46□□□□□ -1.86
HOXD12P35452 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD12P35452 GABRG2-229ENST00000641017 3628 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 RNU1-105P-201ENST00000363470 161 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 Y_RNA.263-201ENST00000364659 114 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 SNORD81.2-201ENST00000365153 76 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AL122016.1-201ENST00000403365 367 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 RNU2-33P-201ENST00000410344 192 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 PDCL2P1-201ENST00000419302 352 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD12P35452 BX679664.1-201ENST00000434429 253 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 MTND4LP16-201ENST00000440828 295 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD12P35452 AC104058.1-201ENST00000448028 297 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 TRBV1-201ENST00000476502 284 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 RPL21P13-201ENST00000488305 481 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 TRBV12-2-201ENST00000489763 344 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXD12P35452 Y_RNA.665-201ENST00000516177 98 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD12P35452 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD12P35452 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD12P35452 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD12P35452 AC005261.5-201ENST00000596280 355 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AL117336.2-201ENST00000602435 335 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AC092807.2-201ENST00000609367 243 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 AL732372.2-225ENST00000642124 456 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXD12P35452 AL353743.1-202ENST00000431724 1695 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD12P35452 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
HOXD12P35452 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HOXD12P35452 AC008669.1-201ENST00000565823 2178 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD12P35452 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD12P35452 Y_RNA.61-201ENST00000362835 102 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 RNU6-522P-201ENST00000364497 107 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 Y_RNA.356-201ENST00000365475 113 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 MT-TD-201ENST00000387419 68 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 AL592114.1-201ENST00000403842 483 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 AL139397.2-201ENST00000404529 772 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD12P35452 RN7SKP32-201ENST00000410167 303 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 DBIP2-201ENST00000419076 262 ntBASIC3.44□□□□□ -1.86
HOXD12P35452 ATG3P1-201ENST00000419507 911 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms