Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX1P22670 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX1P22670 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RFX1P22670 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX1P22670 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RFX1P22670 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX1P22670 RNU6-884P-201ENST00000363889 107 ntBASIC5.01□□□□□ -1.61
RFX1P22670 Y_RNA.518-201ENST00000384552 113 ntBASIC5.01□□□□□ -1.61
RFX1P22670 MIR129-1-201ENST00000384972 72 ntBASIC5.01□□□□□ -1.61
RFX1P22670 EIF1AXP1-201ENST00000419267 435 ntBASIC5.01□□□□□ -1.61
RFX1P22670 RPL23AP1-201ENST00000428990 471 ntBASIC5.01□□□□□ -1.61
RFX1P22670 ARL5AP4-201ENST00000430731 512 ntBASIC5.01□□□□□ -1.61
RFX1P22670 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX1P22670 AC034236.1-201ENST00000469891 373 ntBASIC5.01□□□□□ -1.61
RFX1P22670 RN7SL41P-201ENST00000476144 297 ntBASIC5.01□□□□□ -1.61
RFX1P22670 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RFX1P22670 RPS4XP13-201ENST00000483219 789 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AF213884.1-201ENST00000488102 463 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AC015795.1-201ENST00000513669 327 ntBASIC5.01□□□□□ -1.61
RFX1P22670 MIR2116-201ENST00000517221 80 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AP003733.2-201ENST00000529409 171 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AC011602.1-201ENST00000546484 331 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AL442163.3-201ENST00000554110 156 ntBASIC5.01□□□□□ -1.61
RFX1P22670 MIR3160-1-201ENST00000577972 85 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX1P22670 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RFX1P22670 AC005086.4-201ENST00000623065 213 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.01□□□□□ -1.61
RFX1P22670 AC241585.2-209ENST00000638217 143 ntBASIC5.01□□□□□ -1.61
RFX1P22670 AC087190.4-201ENST00000574616 8334 ntBASIC5.01□□□□□ -1.61
RFX1P22670 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX1P22670 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX1P22670 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX1P22670 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5□□□□□ -1.61
RFX1P22670 AC000123.3-201ENST00000624029 4975 ntBASIC5□□□□□ -1.61
RFX1P22670 Y_RNA.14-201ENST00000362415 103 ntBASIC5□□□□□ -1.61
RFX1P22670 RNU1-64P-201ENST00000365443 163 ntBASIC5□□□□□ -1.61
RFX1P22670 Y_RNA.358-201ENST00000365491 99 ntBASIC5□□□□□ -1.61
RFX1P22670 Y_RNA.552-201ENST00000384665 112 ntBASIC5□□□□□ -1.61
RFX1P22670 RNU6-130P-201ENST00000411112 103 ntBASIC5□□□□□ -1.61
RFX1P22670 RAB9AP3-201ENST00000412737 573 ntBASIC5□□□□□ -1.61
RFX1P22670 AC140479.3-201ENST00000418944 1126 ntBASIC5□□□□□ -1.61
RFX1P22670 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5□□□□□ -1.61
RFX1P22670 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5□□□□□ -1.61
RFX1P22670 AP000907.1-201ENST00000428428 510 ntBASIC5□□□□□ -1.61
RFX1P22670 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5□□□□□ -1.61
RFX1P22670 RAB9AP1-201ENST00000449393 573 ntBASIC5□□□□□ -1.61
RFX1P22670 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5□□□□□ -1.61
RFX1P22670 snoU13.30-201ENST00000458951 104 ntBASIC5□□□□□ -1.61
RFX1P22670 RPL7AP28-201ENST00000464513 571 ntBASIC5□□□□□ -1.61
RFX1P22670 AC025465.3-201ENST00000510570 311 ntBASIC5□□□□□ -1.61
RFX1P22670 AC016256.1-201ENST00000547971 354 ntBASIC5□□□□□ -1.61
RFX1P22670 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX1P22670 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5□□□□□ -1.61
RFX1P22670 MIR3939-201ENST00000582614 106 ntBASIC5□□□□□ -1.61
RFX1P22670 AC091178.1-203ENST00000584586 279 ntBASIC5□□□□□ -1.61
RFX1P22670 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
RFX1P22670 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5□□□□□ -1.61
RFX1P22670 AC004825.2-201ENST00000616634 455 ntBASIC5□□□□□ -1.61
RFX1P22670 SCARNA4-201ENST00000629045 128 ntBASIC5□□□□□ -1.61
RFX1P22670 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5□□□□□ -1.61
RFX1P22670 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX1P22670 AC009541.1-201ENST00000438279 2662 ntBASIC5□□□□□ -1.61
RFX1P22670 RLIMP1-201ENST00000339626 1680 ntBASIC4.99□□□□□ -1.61
RFX1P22670 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RFX1P22670 AC233981.2-201ENST00000611524 1614 ntBASIC4.99□□□□□ -1.61
RFX1P22670 SNORA71.2-201ENST00000364941 134 ntBASIC4.99□□□□□ -1.61
RFX1P22670 RNU1-100P-201ENST00000365255 165 ntBASIC4.99□□□□□ -1.61
RFX1P22670 Y_RNA.458-201ENST00000384240 102 ntBASIC4.99□□□□□ -1.61
RFX1P22670 SNORD96B-201ENST00000386148 79 ntBASIC4.99□□□□□ -1.61
RFX1P22670 SDHCP2-201ENST00000398565 501 ntBASIC4.99□□□□□ -1.61
RFX1P22670 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 HSPE1P26-201ENST00000405341 275 ntBASIC4.99□□□□□ -1.61
RFX1P22670 RNU2-38P-201ENST00000410856 79 ntBASIC4.99□□□□□ -1.61
RFX1P22670 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX1P22670 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX1P22670 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 AC243964.1-201ENST00000441814 261 ntBASIC4.99□□□□□ -1.61
RFX1P22670 AC125238.1-201ENST00000448842 249 ntBASIC4.99□□□□□ -1.61
RFX1P22670 ISCUP1-201ENST00000454451 448 ntBASIC4.99□□□□□ -1.61
RFX1P22670 RPL21P129-201ENST00000491732 478 ntBASIC4.99□□□□□ -1.61
RFX1P22670 RNA5SP446-201ENST00000515955 82 ntBASIC4.99□□□□□ -1.61
RFX1P22670 Y_RNA.713-201ENST00000517013 96 ntBASIC4.99□□□□□ -1.61
RFX1P22670 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX1P22670 HIGD1AP1-201ENST00000550979 275 ntBASIC4.99□□□□□ -1.61
RFX1P22670 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.99□□□□□ -1.61
RFX1P22670 AC007224.1-201ENST00000564410 144 ntBASIC4.99□□□□□ -1.61
RFX1P22670 MIR3128-201ENST00000581957 66 ntBASIC4.99□□□□□ -1.61
RFX1P22670 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX1P22670 VN1R85P-201ENST00000601587 426 ntBASIC4.99□□□□□ -1.61
RFX1P22670 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.99□□□□□ -1.61
RFX1P22670 AC024581.2-201ENST00000619986 252 ntBASIC4.99□□□□□ -1.61
RFX1P22670 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFX1P22670 AC091903.1-201ENST00000624322 454 ntBASIC4.99□□□□□ -1.61
RFX1P22670 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.99□□□□□ -1.61
RFX1P22670 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX1P22670 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms