Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MIR3158-1-201ENST00000583596 81 ntBASIC4.73□□□□□ -1.65
HOXD8P13378 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD8P13378 AC240442.1-201ENST00000616055 283 ntBASIC4.73□□□□□ -1.65
HOXD8P13378 AC099669.2-201ENST00000616549 437 ntBASIC4.73□□□□□ -1.65
HOXD8P13378 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD8P13378 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD8P13378 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HOXD8P13378 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD8P13378 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD8P13378 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD8P13378 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXD8P13378 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD8P13378 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXD8P13378 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD8P13378 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HOXD8P13378 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD8P13378 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD8P13378 MIR208A-201ENST00000362287 71 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 RNU5E-7P-201ENST00000365290 117 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
HOXD8P13378 SNORA53-201ENST00000391141 249 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 SNORA11.1-201ENST00000408133 129 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD8P13378 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXD8P13378 MTCO1P39-201ENST00000426148 480 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC091390.3-201ENST00000426478 338 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD8P13378 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXD8P13378 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD8P13378 AL160314.1-201ENST00000490836 438 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC108022.1-201ENST00000493466 478 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC107393.1-201ENST00000512403 346 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD8P13378 AC025755.1-201ENST00000521306 278 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 MIR4659A-201ENST00000580269 81 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXD8P13378 AL645944.1-201ENST00000603857 493 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC037487.3-201ENST00000606668 112 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC011476.5-201ENST00000615594 130 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 AC131238.1-201ENST00000617135 328 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 BMS1P21-201ENST00000634565 365 ntBASIC4.72□□□□□ -1.65
HOXD8P13378 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD8P13378 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXD8P13378 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXD8P13378 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXD8P13378 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXD8P13378 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXD8P13378 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXD8P13378 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HOXD8P13378 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD8P13378 PCAT14-202ENST00000627127 3935 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD8P13378 RNU6-290P-201ENST00000365212 101 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXD8P13378 RNU6-493P-201ENST00000391321 108 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 BTF3L4P2-201ENST00000392798 346 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD8P13378 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXD8P13378 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD8P13378 AC124916.1-201ENST00000444020 547 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 TMSB4XP3-201ENST00000445144 114 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD8P13378 RNU7-120P-201ENST00000459334 63 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXD8P13378 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD8P13378 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXD8P13378 RNU6-1278P-201ENST00000516130 107 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 RNU6-1256P-201ENST00000516539 103 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 SNORA31.19-201ENST00000517079 126 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 ATP5F1P5-201ENST00000526403 760 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 CBX3P4-201ENST00000538909 354 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 RN7SL703P-201ENST00000578485 302 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 AC233702.9-201ENST00000581528 203 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD8P13378 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXD8P13378 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXD8P13378 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
HOXD8P13378 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HOXD8P13378 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
HOXD8P13378 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD8P13378 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD8P13378 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD8P13378 AL365440.1-201ENST00000436135 2167 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 DEFB108F-201ENST00000344638 222 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RNU4-90P-201ENST00000362773 141 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RNU6-1159P-201ENST00000362933 107 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RNA5SP513-201ENST00000364648 118 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RNA5SP235-201ENST00000365411 114 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RNU6-926P-201ENST00000384075 107 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 MIR670-201ENST00000390142 98 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 SNORD66.1-201ENST00000391230 76 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 RPL21P65-201ENST00000406094 466 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms