Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-454P-201ENST00000364292 107 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 Y_RNA.368-201ENST00000365547 113 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 RNU6-144P-201ENST00000383951 107 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 Y_RNA.437-201ENST00000384113 113 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 MIR483-201ENST00000385070 76 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 RNA5SP475-201ENST00000410568 110 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 CRYBB2P1-203ENST00000415709 538 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 CRIP1P1-201ENST00000427567 185 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 AC087588.1-201ENST00000462203 316 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 AP000769.2-201ENST00000602344 396 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 SNORA43.4-201ENST00000629559 138 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
GFRA3O60609 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
GFRA3O60609 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 MIR367-201ENST00000362299 68 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 Y_RNA.179-201ENST00000363844 90 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RPS26P8-201ENST00000393490 348 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RPL21P67-201ENST00000402896 478 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 SNORA79-201ENST00000408376 140 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RPEP3-201ENST00000425462 676 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
GFRA3O60609 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA3O60609 AL021397.1-201ENST00000451806 248 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RPL12P39-201ENST00000455456 496 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RPL23AP24-201ENST00000458203 385 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RN7SL132P-201ENST00000478131 296 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 AC012158.1-204ENST00000483430 465 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 UBE2CP3-201ENST00000502715 450 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 RNU1-45P-201ENST00000517191 141 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 MIR5009-201ENST00000578736 100 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 MIR3138-201ENST00000585238 82 ntBASIC4.98□□□□□ -1.61
GFRA3O60609 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
GFRA3O60609 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
GFRA3O60609 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA3O60609 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.97□□□□□ -1.61
GFRA3O60609 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
GFRA3O60609 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 TTC41P-205ENST00000551270 3963 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 Y_RNA.310-201ENST00000365063 113 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 AL512633.1-201ENST00000399931 655 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RPL31P2-201ENST00000413849 377 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RPS4XP2-201ENST00000458402 793 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RNU7-171P-201ENST00000459581 62 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RN7SL443P-201ENST00000464331 290 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RNU6-347P-201ENST00000516658 105 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RNU6-197P-201ENST00000516680 100 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 SNORA31.22-201ENST00000517204 135 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 RNU6-840P-201ENST00000517275 65 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 MED28P6-201ENST00000558776 231 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA3O60609 AC090132.2-201ENST00000615881 347 ntBASIC4.97□□□□□ -1.61
GFRA3O60609 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA3O60609 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA3O60609 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
GFRA3O60609 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA3O60609 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA3O60609 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GFRA3O60609 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
GFRA3O60609 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.96□□□□□ -1.61
GFRA3O60609 SAGE4P-201ENST00000442271 3381 ntBASIC4.96□□□□□ -1.61
GFRA3O60609 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
GFRA3O60609 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
GFRA3O60609 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA3O60609 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA3O60609 SNORD1C-201ENST00000363315 78 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms