Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL355433.1-201ENST00000422804 300 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 CKS1BP5-201ENST00000434172 273 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 AC010095.1-201ENST00000443543 144 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 RN7SKP164-201ENST00000516138 266 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 AC100767.1-201ENST00000528178 123 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 DEFB117-201ENST00000602356 141 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 SUMO2P15-201ENST00000604285 278 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 AC099669.2-201ENST00000616549 437 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 MIR6886-201ENST00000619864 61 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 SRP72P2-201ENST00000344851 1979 ntBASIC5.43□□□□□ -1.54
ACTN4O43707 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ACTN4O43707 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ACTN4O43707 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ACTN4O43707 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.42□□□□□ -1.54
ACTN4O43707 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 RNU1-83P-201ENST00000363426 164 ntBASIC5.42□□□□□ -1.54
ACTN4O43707 Y_RNA.172-201ENST00000363765 102 ntBASIC5.42□□□□□ -1.54
ACTN4O43707 MIR487A-201ENST00000385009 80 ntBASIC5.42□□□□□ -1.54
ACTN4O43707 AC138623.1-201ENST00000418060 216 ntBASIC5.42□□□□□ -1.54
ACTN4O43707 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.42□□□□□ -1.54
ACTN4O43707 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.42□□□□□ -1.54
ACTN4O43707 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 AC107016.1-201ENST00000550463 337 ntBASIC5.42□□□□□ -1.54
ACTN4O43707 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.42□□□□□ -1.54
ACTN4O43707 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.42□□□□□ -1.54
ACTN4O43707 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.42□□□□□ -1.54
ACTN4O43707 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ACTN4O43707 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ACTN4O43707 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ACTN4O43707 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ACTN4O43707 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.41□□□□□ -1.54
ACTN4O43707 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ACTN4O43707 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.41□□□□□ -1.54
ACTN4O43707 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ACTN4O43707 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ACTN4O43707 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
ACTN4O43707 RNU6-103P-201ENST00000363686 107 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNU6-173P-201ENST00000364215 104 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 Y_RNA.337-201ENST00000365312 102 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RN7SKP229-201ENST00000410465 302 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNU6-1245P-201ENST00000411130 106 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNU6-625P-201ENST00000459412 107 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 Y_RNA.637-201ENST00000459424 114 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNA5SP103-201ENST00000459503 118 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 AC108751.2-201ENST00000469993 231 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RN7SL346P-201ENST00000491561 294 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNU6-155P-201ENST00000516347 100 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 RNA5SP34-201ENST00000516887 130 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.41□□□□□ -1.54
ACTN4O43707 AC009127.3-201ENST00000570531 403 ntBASIC5.41□□□□□ -1.54
ACTN4O43707 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.41□□□□□ -1.54
ACTN4O43707 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ACTN4O43707 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ACTN4O43707 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.41□□□□□ -1.54
ACTN4O43707 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ACTN4O43707 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
ACTN4O43707 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.4□□□□□ -1.54
ACTN4O43707 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.4□□□□□ -1.54
ACTN4O43707 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ACTN4O43707 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ACTN4O43707 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ACTN4O43707 Y_RNA.101-201ENST00000363154 102 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 SNORD37.2-201ENST00000391075 66 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 Z85995.1-201ENST00000415547 335 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.4□□□□□ -1.54
ACTN4O43707 AC007919.1-201ENST00000429380 217 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.4□□□□□ -1.54
ACTN4O43707 AC140172.1-201ENST00000502928 141 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.4□□□□□ -1.54
ACTN4O43707 RN7SKP179-201ENST00000516126 217 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 RNA5SP76-201ENST00000516277 87 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 SCARNA15.2-201ENST00000516409 127 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 SNORA43.2-201ENST00000516652 128 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 Y_RNA.709-201ENST00000516952 92 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC115990.1-201ENST00000526957 301 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC090877.1-201ENST00000561418 344 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC024940.4-201ENST00000605507 246 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AL121932.1-201ENST00000605542 214 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC069294.1-201ENST00000608397 350 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 AC010999.1-201ENST00000611856 324 ntBASIC5.4□□□□□ -1.54
ACTN4O43707 TLK1P1-201ENST00000456760 2440 ntBASIC5.4□□□□□ -1.55
ACTN4O43707 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
ACTN4O43707 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ACTN4O43707 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.4□□□□□ -1.55
ACTN4O43707 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.4□□□□□ -1.55
ACTN4O43707 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ACTN4O43707 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ACTN4O43707 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms