Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DENRO43583 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DENRO43583 U8.2-201ENST00000363156 134 ntBASIC1.49□□□□□ -2.17
DENRO43583 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DENRO43583 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
DENRO43583 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.49□□□□□ -2.17
DENRO43583 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.49□□□□□ -2.17
DENRO43583 ISCA1P1-201ENST00000426679 387 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.49□□□□□ -2.17
DENRO43583 AL592045.1-201ENST00000429867 352 ntBASIC1.49□□□□□ -2.17
DENRO43583 HMGB1P27-201ENST00000431429 603 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.49□□□□□ -2.17
DENRO43583 RSU1P2-202ENST00000437884 485 ntBASIC1.49□□□□□ -2.17
DENRO43583 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.49□□□□□ -2.17
DENRO43583 FAM103A2P-201ENST00000444122 354 ntBASIC1.49□□□□□ -2.17
DENRO43583 RNU7-59P-201ENST00000459101 61 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC112771.1-201ENST00000463581 102 ntBASIC1.49□□□□□ -2.17
DENRO43583 TRBV12-1-201ENST00000479785 344 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC104629.1-201ENST00000494226 508 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.49□□□□□ -2.17
DENRO43583 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.49□□□□□ -2.17
DENRO43583 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DENRO43583 RNU6-703P-201ENST00000516946 107 ntBASIC1.49□□□□□ -2.17
DENRO43583 RNU6-1183P-201ENST00000517054 60 ntBASIC1.49□□□□□ -2.17
DENRO43583 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
DENRO43583 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.49□□□□□ -2.17
DENRO43583 AC023813.2-201ENST00000564321 469 ntBASIC1.49□□□□□ -2.17
DENRO43583 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.49□□□□□ -2.17
DENRO43583 MTND5P33-201ENST00000571250 1450 ntBASIC1.49□□□□□ -2.17
DENRO43583 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.48□□□□□ -2.17
DENRO43583 RNU6-288P-201ENST00000363690 104 ntBASIC1.48□□□□□ -2.17
DENRO43583 RNA5SP240-201ENST00000365355 128 ntBASIC1.48□□□□□ -2.17
DENRO43583 RNU6-701P-201ENST00000384059 107 ntBASIC1.48□□□□□ -2.17
DENRO43583 Y_RNA.465-201ENST00000384293 102 ntBASIC1.48□□□□□ -2.17
DENRO43583 SNORA40.19-201ENST00000390846 128 ntBASIC1.48□□□□□ -2.17
DENRO43583 RNU6-1000P-201ENST00000391066 106 ntBASIC1.48□□□□□ -2.17
DENRO43583 OR51A5P-201ENST00000415429 942 ntBASIC1.48□□□□□ -2.17
DENRO43583 AC083875.1-201ENST00000419509 405 ntBASIC1.48□□□□□ -2.17
DENRO43583 AL445669.1-201ENST00000426743 755 ntBASIC1.48□□□□□ -2.17
DENRO43583 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.48□□□□□ -2.17
DENRO43583 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.48□□□□□ -2.17
DENRO43583 RPL32P28-201ENST00000443577 397 ntBASIC1.48□□□□□ -2.17
DENRO43583 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.48□□□□□ -2.17
DENRO43583 RPF2P2-201ENST00000504693 896 ntBASIC1.48□□□□□ -2.17
DENRO43583 HSPE1P18-201ENST00000517602 280 ntBASIC1.48□□□□□ -2.17
DENRO43583 RANP3-201ENST00000530970 276 ntBASIC1.48□□□□□ -2.17
DENRO43583 MRPS36P5-201ENST00000551909 298 ntBASIC1.48□□□□□ -2.17
DENRO43583 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.48□□□□□ -2.17
DENRO43583 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.48□□□□□ -2.17
DENRO43583 AC009712.1-201ENST00000564938 316 ntBASIC1.48□□□□□ -2.17
DENRO43583 AC012213.3-201ENST00000577199 777 ntBASIC1.48□□□□□ -2.17
DENRO43583 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
DENRO43583 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.48□□□□□ -2.17
DENRO43583 MIR5739-201ENST00000619803 80 ntBASIC1.48□□□□□ -2.17
DENRO43583 AC013437.2-201ENST00000639587 677 ntBASIC1.48□□□□□ -2.17
DENRO43583 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
DENRO43583 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
DENRO43583 RNA5SP126-201ENST00000365092 109 ntBASIC1.47□□□□□ -2.17
DENRO43583 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
DENRO43583 ERHP2-201ENST00000402323 299 ntBASIC1.47□□□□□ -2.17
DENRO43583 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
DENRO43583 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
DENRO43583 RN7SKP101-201ENST00000411376 320 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC007098.1-201ENST00000420122 367 ntBASIC1.47□□□□□ -2.17
DENRO43583 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 AC097463.2-201ENST00000421074 142 ntBASIC1.47□□□□□ -2.17
DENRO43583 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.47□□□□□ -2.17
DENRO43583 AC003989.2-201ENST00000440224 169 ntBASIC1.47□□□□□ -2.17
DENRO43583 EEF1A1P39-201ENST00000440791 250 ntBASIC1.47□□□□□ -2.17
DENRO43583 MTND4P25-201ENST00000441039 533 ntBASIC1.47□□□□□ -2.17
DENRO43583 MTCO1P53-201ENST00000441633 699 ntBASIC1.47□□□□□ -2.17
DENRO43583 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 RPL22P13-201ENST00000493291 347 ntBASIC1.47□□□□□ -2.17
DENRO43583 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
DENRO43583 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.47□□□□□ -2.17
DENRO43583 AC010376.1-201ENST00000522101 334 ntBASIC1.47□□□□□ -2.17
DENRO43583 AP000907.2-201ENST00000530827 353 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.47□□□□□ -2.17
DENRO43583 MIR4293-201ENST00000584305 78 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.47□□□□□ -2.17
DENRO43583 AC104763.2-201ENST00000604179 382 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 AF129408.1-201ENST00000608767 431 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC009974.1-201ENST00000608881 455 ntBASIC1.47□□□□□ -2.17
DENRO43583 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.47□□□□□ -2.17
DENRO43583 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.47□□□□□ -2.17
DENRO43583 AL138955.1-201ENST00000622881 1040 ntBASIC1.47□□□□□ -2.17
DENRO43583 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
DENRO43583 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
DENRO43583 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
DENRO43583 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
DENRO43583 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
DENRO43583 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
DENRO43583 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.46□□□□□ -2.18
DENRO43583 RNU6-1280P-201ENST00000365211 107 ntBASIC1.46□□□□□ -2.18
DENRO43583 RNA5SP88-201ENST00000365560 109 ntBASIC1.46□□□□□ -2.18
DENRO43583 RNU6-898P-201ENST00000365627 104 ntBASIC1.46□□□□□ -2.18
DENRO43583 Z98749.2-208ENST00000381646 500 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms