Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
CEP290O15078 U3.20-201ENST00000390909 217 ntBASIC0.35□□□□□ -2.35
CEP290O15078 PDCL2P1-201ENST00000419302 352 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.35□□□□□ -2.35
CEP290O15078 RPL23AP95-201ENST00000426806 265 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.35□□□□□ -2.35
CEP290O15078 TPMTP4-201ENST00000450749 678 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.35□□□□□ -2.35
CEP290O15078 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.35□□□□□ -2.35
CEP290O15078 snoU13.4-201ENST00000458916 104 ntBASIC0.35□□□□□ -2.35
CEP290O15078 snoU13.28-201ENST00000459235 104 ntBASIC0.35□□□□□ -2.35
CEP290O15078 RNU7-27P-201ENST00000459281 62 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.35□□□□□ -2.35
CEP290O15078 AC112206.3-201ENST00000514578 389 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.35□□□□□ -2.35
CEP290O15078 MIR4493-201ENST00000584016 73 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AC040174.2-201ENST00000602701 465 ntBASIC0.35□□□□□ -2.35
CEP290O15078 AC096656.1-201ENST00000623826 1364 ntBASIC0.34□□□□□ -2.35
CEP290O15078 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.34□□□□□ -2.35
CEP290O15078 RPL37P21-201ENST00000435890 276 ntBASIC0.34□□□□□ -2.36
CEP290O15078 RPL7P29-201ENST00000437151 728 ntBASIC0.34□□□□□ -2.36
CEP290O15078 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.34□□□□□ -2.36
CEP290O15078 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.34□□□□□ -2.36
CEP290O15078 AC138853.1-201ENST00000503549 823 ntBASIC0.34□□□□□ -2.36
CEP290O15078 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CEP290O15078 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.34□□□□□ -2.36
CEP290O15078 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.34□□□□□ -2.36
CEP290O15078 AC090666.1-201ENST00000578241 445 ntBASIC0.34□□□□□ -2.36
CEP290O15078 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.34□□□□□ -2.36
CEP290O15078 PCNAP1-202ENST00000595299 752 ntBASIC0.34□□□□□ -2.36
CEP290O15078 AC008945.2-201ENST00000606056 604 ntBASIC0.34□□□□□ -2.36
CEP290O15078 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CEP290O15078 AC104763.3-201ENST00000613765 618 ntBASIC0.34□□□□□ -2.36
CEP290O15078 AP003400.5-201ENST00000624827 617 ntBASIC0.34□□□□□ -2.36
CEP290O15078 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.33□□□□□ -2.36
CEP290O15078 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.33□□□□□ -2.36
CEP290O15078 ELOCP11-201ENST00000436690 332 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.33□□□□□ -2.36
CEP290O15078 ELOCP16-201ENST00000444494 332 ntBASIC0.33□□□□□ -2.36
CEP290O15078 snoU13.7-201ENST00000459220 104 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AC107953.1-201ENST00000522216 297 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.33□□□□□ -2.36
CEP290O15078 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
CEP290O15078 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.33□□□□□ -2.36
CEP290O15078 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.33□□□□□ -2.36
CEP290O15078 MIR3609-201ENST00000582661 80 ntBASIC0.33□□□□□ -2.36
CEP290O15078 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CEP290O15078 SNORA8-201ENST00000384574 139 ntBASIC0.33□□□□□ -2.36
CEP290O15078 RNU6-1184P-201ENST00000384588 108 ntBASIC0.33□□□□□ -2.36
CEP290O15078 MIR320B1-201ENST00000390209 79 ntBASIC0.33□□□□□ -2.36
CEP290O15078 BTF3L4P2-201ENST00000392798 346 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AC099677.1-201ENST00000420575 175 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.33□□□□□ -2.36
CEP290O15078 NDUFB4P7-201ENST00000423198 363 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.33□□□□□ -2.36
CEP290O15078 AF213884.2-201ENST00000510417 903 ntBASIC0.33□□□□□ -2.36
CEP290O15078 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.33□□□□□ -2.36
CEP290O15078 AC015849.6-201ENST00000605454 474 ntBASIC0.33□□□□□ -2.36
CEP290O15078 AC087821.2-201ENST00000637086 450 ntBASIC0.33□□□□□ -2.36
CEP290O15078 MIR26B-201ENST00000362251 77 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AL356421.1-201ENST00000403255 413 ntBASIC0.32□□□□□ -2.36
CEP290O15078 RNU6-1328P-201ENST00000410938 106 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AC119618.1-201ENST00000434191 222 ntBASIC0.32□□□□□ -2.36
CEP290O15078 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.32□□□□□ -2.36
CEP290O15078 PRPS1P1-201ENST00000445305 876 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.32□□□□□ -2.36
CEP290O15078 RNU6-491P-201ENST00000516099 110 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AL391834.1-201ENST00000609609 560 ntBASIC0.32□□□□□ -2.36
CEP290O15078 MIR7157-201ENST00000635801 60 ntBASIC0.32□□□□□ -2.36
CEP290O15078 MIR618-201ENST00000385287 98 ntBASIC0.32□□□□□ -2.36
CEP290O15078 MT-TP-201ENST00000387461 68 ntBASIC0.32□□□□□ -2.36
CEP290O15078 RPS3AP37-201ENST00000419176 745 ntBASIC0.32□□□□□ -2.36
CEP290O15078 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.32□□□□□ -2.36
CEP290O15078 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.32□□□□□ -2.36
CEP290O15078 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CEP290O15078 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.32□□□□□ -2.36
CEP290O15078 RPS29P8-201ENST00000445109 171 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
CEP290O15078 RNU6-420P-201ENST00000458780 107 ntBASIC0.32□□□□□ -2.36
CEP290O15078 SCARNA11.3-201ENST00000517276 130 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.32□□□□□ -2.36
CEP290O15078 AP006587.4-201ENST00000526053 529 ntBASIC0.32□□□□□ -2.36
CEP290O15078 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.32□□□□□ -2.36
CEP290O15078 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.32□□□□□ -2.36
CEP290O15078 HSBP1P2-201ENST00000299671 229 ntBASIC0.31□□□□□ -2.36
CEP290O15078 SNORA51.6-201ENST00000384151 125 ntBASIC0.31□□□□□ -2.36
CEP290O15078 Z77249.1-201ENST00000444622 1175 ntBASIC0.31□□□□□ -2.36
CEP290O15078 LARP7P4-201ENST00000481075 878 ntBASIC0.31□□□□□ -2.36
CEP290O15078 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.31□□□□□ -2.36
CEP290O15078 HSPE1P19-201ENST00000603327 295 ntBASIC0.31□□□□□ -2.36
CEP290O15078 FRG1HP-204ENST00000617940 757 ntBASIC0.31□□□□□ -2.36
CEP290O15078 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.31□□□□□ -2.36
CEP290O15078 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CEP290O15078 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CEP290O15078 RNA5SP391-201ENST00000363456 119 ntBASIC0.31□□□□□ -2.36
CEP290O15078 RNU6-1187P-201ENST00000364771 110 ntBASIC0.31□□□□□ -2.36
CEP290O15078 RNU1-36P-201ENST00000365130 165 ntBASIC0.31□□□□□ -2.36
CEP290O15078 MIR608-201ENST00000384820 100 ntBASIC0.31□□□□□ -2.36
CEP290O15078 AL589655.1-201ENST00000405398 482 ntBASIC0.31□□□□□ -2.36
CEP290O15078 MIR1250-201ENST00000408098 113 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms