Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU4-79P-201ENST00000362764 141 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 Y_RNA.535-201ENST00000384612 99 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 UBE2V1P7-201ENST00000446395 340 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC113155.1-201ENST00000511141 769 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 RAC1P2-201ENST00000511164 579 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 SNORA74D-201ENST00000516404 141 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 SCARNA13-201ENST00000516672 275 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC020895.1-201ENST00000595362 272 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AL137849.1-201ENST00000604767 169 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AL160281.1-201ENST00000605307 311 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC011890.2-201ENST00000613393 294 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 MIR6128-201ENST00000615528 109 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3L4A6NDZ8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
MBD3L4A6NDZ8 AC110491.1-201ENST00000562191 2010 ntBASIC3.34□□□□□ -1.88
MBD3L4A6NDZ8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
MBD3L4A6NDZ8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC073346.2-201ENST00000624724 2058 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-694P-201ENST00000364071 147 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-827P-201ENST00000365553 106 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-601P-201ENST00000384540 107 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 MIR518D-201ENST00000385014 87 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AL391417.1-201ENST00000404100 426 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNU4-14P-201ENST00000410858 122 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC011742.1-201ENST00000431448 434 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RPS3AP46-201ENST00000448352 682 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 Y_RNA.632-201ENST00000459189 102 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AP002884.2-201ENST00000471647 395 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC106707.2-201ENST00000484182 374 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC018437.1-201ENST00000492214 406 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RNU1-54P-201ENST00000517181 120 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC090877.1-201ENST00000561418 344 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC012603.1-201ENST00000606424 528 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 MIR6134-201ENST00000617606 109 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AL359757.2-201ENST00000624309 274 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
MBD3L4A6NDZ8 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 MIR448-201ENST00000362131 111 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-78P-201ENST00000362897 107 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-1297P-201ENST00000384415 104 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 MIR183-201ENST00000384958 110 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-370P-201ENST00000411008 104 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNU6-293P-201ENST00000411259 106 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 MTND4P28-201ENST00000426217 387 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RPS15AP10-201ENST00000432472 382 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 AC236972.2-201ENST00000434979 310 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RPS15AP5-201ENST00000436276 388 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 FABP5P14-201ENST00000437273 393 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RPL7P28-201ENST00000437739 740 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 AL714022.1-201ENST00000439897 151 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
MBD3L4A6NDZ8 RNU7-187P-201ENST00000458985 68 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms