Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL021407.1-201ENST00000404531 386 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR1283-2-201ENST00000408621 87 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 EIF4EP2-201ENST00000422816 654 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 GTF2IP3-201ENST00000433887 494 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 USP9YP24-201ENST00000434374 697 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 FTH1P25-201ENST00000447665 469 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 KATNBL1P6-201ENST00000453433 915 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 SSXP1-201ENST00000453640 473 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC010631.1-201ENST00000474150 156 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC104563.1-201ENST00000476147 376 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA31.3-201ENST00000516029 96 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 DEFB130C-202ENST00000530001 230 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR4713-201ENST00000582691 75 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR4769-201ENST00000584126 77 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 BNIP3P25-201ENST00000596023 559 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091057.3-201ENST00000602684 733 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 SNRPGP17-201ENST00000603780 214 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-91P-201ENST00000607774 107 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091953.2-201ENST00000623979 160 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TRAV1-1A0A0B4J248 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL591034.2-201ENST00000402839 359 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL449283.1-202ENST00000418249 604 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 MTCO2P1-201ENST00000424648 477 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 C1DP1-201ENST00000426049 402 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 SDAD1P3-201ENST00000427380 333 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 RPL36AP53-201ENST00000432891 316 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 MTND4P15-201ENST00000437913 1033 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 BRK1P2-201ENST00000442875 223 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 OR6C5P-201ENST00000452388 923 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL137159.1-201ENST00000452808 512 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC092001.1-201ENST00000453012 261 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL441985.1-201ENST00000457727 251 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC011005.2-201ENST00000487324 359 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC139453.3-201ENST00000493276 369 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC021146.2-201ENST00000504736 556 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 SNORA25.11-201ENST00000515935 105 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU5B-3P-201ENST00000516601 115 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-678P-201ENST00000516832 109 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-1183P-201ENST00000517054 60 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 CYB5AP5-201ENST00000549779 389 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC104072.1-201ENST00000568817 668 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC026271.5-201ENST00000577873 130 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR6845-201ENST00000613182 61 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC108479.2-201ENST00000617314 601 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 AC068880.4-201ENST00000623082 495 ntBASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR126-201ENST00000362291 85 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU1-23P-201ENST00000363361 144 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU2-48P-201ENST00000410694 191 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 OR51A5P-201ENST00000415429 942 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RPL17P35-201ENST00000432217 549 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RPS15AP9-201ENST00000439856 381 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC104058.1-201ENST00000448028 297 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 CKS1BP2-201ENST00000497342 240 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC116655.1-201ENST00000508324 901 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RNA5SP458-201ENST00000516188 119 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-334P-201ENST00000517072 102 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 OR5B19P-201ENST00000531766 928 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AK6P1-201ENST00000540219 478 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 PSMA3P-201ENST00000555485 635 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 NDUFA8P1-201ENST00000605525 367 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms