Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AP001486.2-201ENST00000561652 5113 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 RNU1-18P-201ENST00000363062 164 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AL590004.1-201ENST00000405321 300 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AL353729.1-201ENST00000425044 720 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 SAR1AP4-201ENST00000429225 591 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AL359672.1-201ENST00000442302 409 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 RPL32P28-201ENST00000443577 397 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 RNU7-138P-201ENST00000459479 64 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC117503.1-201ENST00000472241 394 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC106707.2-201ENST00000484182 374 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 MIR892C-201ENST00000516410 77 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 CASP1P1-201ENST00000526345 212 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AL121821.2-201ENST00000556081 394 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC138761.3-201ENST00000579993 334 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC002044.1-201ENST00000606707 158 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 FAM157A-202ENST00000615155 405 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 AC027309.3-201ENST00000623419 351 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 MTND5P1-201ENST00000445440 1375 ntBASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHB1Q9Y5F3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-562P-201ENST00000362731 107 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 MTND2P23-201ENST00000422990 651 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 BRK1P2-201ENST00000442875 223 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC008526.1-201ENST00000509149 338 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC100830.2-201ENST00000581636 240 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AL645944.1-201ENST00000603857 493 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AL360085.1-201ENST00000604713 532 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 MIR7975-201ENST00000619350 68 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 AC244205.2-202ENST00000635781 342 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB1Q9Y5F3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 MAPK10-372ENST00000641954 3413 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-217P-201ENST00000384164 104 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AL591034.1-201ENST00000407447 340 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 RNU2-3P-201ENST00000410144 191 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 RNU4-14P-201ENST00000410858 122 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 RPL37P10-201ENST00000412884 288 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 MYL8P-204ENST00000431574 518 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AL159987.2-201ENST00000432754 307 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms