Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RNU6-406P-201ENST00000516470 107 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 RNU1-107P-201ENST00000516617 154 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 RNU7-143P-201ENST00000516781 65 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 YPEL5P3-201ENST00000547227 352 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 MIR1273C-201ENST00000578669 77 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 MAPK10-349ENST00000641767 3661 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 NOL8P1-201ENST00000508336 3529 ntBASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTCBQ9Y3I0 AC139713.2-215ENST00000641428 5037 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 RPL9P7-201ENST00000330965 580 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.20-201ENST00000362479 113 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 RNA5SP72-201ENST00000364442 117 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 MIR301A-201ENST00000385261 86 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 RPS29P4-201ENST00000414733 161 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AL096701.2-201ENST00000416920 238 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 MTATP6P4-201ENST00000427725 675 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 HSPD1P21-201ENST00000436541 245 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AL513043.1-201ENST00000439124 535 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC073587.1-201ENST00000447093 876 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC087588.1-201ENST00000462203 316 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 RPL9P9-202ENST00000466501 579 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 HMGN1P11-201ENST00000508668 303 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.700-201ENST00000516806 100 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 RNU6-1315P-201ENST00000517187 99 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 TRAV37-201ENST00000553906 342 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AL161713.1-201ENST00000555538 145 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC008962.1-201ENST00000605729 304 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 MIR432-201ENST00000606207 94 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AL138721.1-201ENST00000616756 179 ntBASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTCBQ9Y3I0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 RNU6-595P-201ENST00000363944 107 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 RNU6-1317P-201ENST00000364582 104 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 SNORA11.2-201ENST00000408318 127 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AL513331.1-201ENST00000411908 397 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 EIF4EP2-201ENST00000422816 654 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 PIGPP3-201ENST00000425307 415 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AC092573.2-201ENST00000434546 243 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 UBE2CP3-201ENST00000502715 450 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 RNU6-789P-201ENST00000517105 102 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AMZ2P1-203ENST00000565833 850 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 MIR5696-201ENST00000578474 85 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AL355877.2-201ENST00000603670 358 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AC012603.1-201ENST00000606424 528 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AC107294.1-201ENST00000609524 467 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 AL353748.2-201ENST00000622148 471 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 U6.105-201ENST00000637379 88 ntBASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTCBQ9Y3I0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 RNU1-35P-201ENST00000362782 153 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 RNU1-76P-201ENST00000362903 159 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.555-201ENST00000384673 110 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms