Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HIGD1AP2-201ENST00000446367 280 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR4298-201ENST00000584380 73 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AL139395.1-201ENST00000603662 160 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR6875-201ENST00000617506 72 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC091953.5-201ENST00000622919 233 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-926P-201ENST00000384075 107 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-1181P-201ENST00000384191 106 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-1140P-201ENST00000410517 106 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC007560.1-201ENST00000426912 237 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AL358472.1-201ENST00000431295 329 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AL627311.1-201ENST00000431514 115 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AL162151.2-201ENST00000448875 158 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 SEPT14P8-201ENST00000508026 178 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC074198.2-201ENST00000508153 258 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC120057.2-201ENST00000571520 271 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 AC090617.7-201ENST00000623952 126 ntBASIC5.47□□□□□ -1.53
ZC3H4Q9UPT8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
ZC3H4Q9UPT8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZC3H4Q9UPT8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC112198.2-201ENST00000426589 6996 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.76-201ENST00000362931 109 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-682P-201ENST00000363843 106 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 MIR34A-201ENST00000385130 110 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC098831.1-201ENST00000440661 216 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RN7SL691P-201ENST00000494487 301 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 MLLT10P2-201ENST00000506434 249 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-377P-201ENST00000515965 102 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-496P-201ENST00000516145 99 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.683-201ENST00000516508 93 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RNA5SP360-201ENST00000516555 118 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC025755.1-201ENST00000521306 278 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 FAM60BP-201ENST00000578364 658 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC233702.9-201ENST00000581528 203 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 RN7SL600P-201ENST00000581811 299 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 SNORA51-201ENST00000606420 132 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 AC012442.3-202ENST00000636742 206 ntBASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ZC3H4Q9UPT8 SDAD1P2-201ENST00000441308 2028 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC007785.2-201ENST00000598627 1916 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.44-201ENST00000362676 108 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 RNU4-90P-201ENST00000362773 141 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.245-201ENST00000364493 95 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 MIR708-201ENST00000390708 88 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 SNORA53-201ENST00000391141 249 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC017079.2-201ENST00000416102 485 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC244098.2-201ENST00000422068 99 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 FTH1P6-201ENST00000430768 320 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC109925.1-201ENST00000478069 331 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC104164.2-201ENST00000496953 495 ntBASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 AC090617.3-201ENST00000573670 475 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms