Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AL031595.2-201ENST00000624215 19071 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 MIR412-201ENST00000362142 91 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.2-201ENST00000362330 96 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 RNU4-35P-201ENST00000362588 141 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.188-201ENST00000363952 111 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.245-201ENST00000364493 95 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 MRPL42P3-201ENST00000401492 326 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 MIR1302-3-201ENST00000408128 138 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 RNU2-3P-201ENST00000410144 191 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 USP9YP30-201ENST00000430729 455 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 PCMTD1P1-201ENST00000455560 355 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AC022493.1-201ENST00000492984 337 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 PHBP14-201ENST00000512887 367 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 RNU6-1137P-201ENST00000517073 99 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 TRAV37-201ENST00000553906 342 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 GNRHR2P1-201ENST00000555315 631 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBP3Q9NS15 SNORD39.4-201ENST00000620099 78 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 U4.1-201ENST00000620349 87 ntBASIC4.46□□□□□ -1.7
LTBP3Q9NS15 AC116096.1-201ENST00000566804 2314 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 MTND5P30-201ENST00000452896 1731 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AC139713.2-215ENST00000641428 5037 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 PNPT1P2-201ENST00000456768 2050 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 RNU6-306P-201ENST00000384617 107 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 SNORA41-201ENST00000384675 132 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 MIR548F4-201ENST00000408515 105 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 TOMM22P1-201ENST00000418578 312 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AC015911.1-201ENST00000495111 156 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.661-201ENST00000516003 99 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 RNU6-1256P-201ENST00000516539 103 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 SNORA70.18-201ENST00000516696 98 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 RNU6-1271P-201ENST00000517049 105 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AC084851.1-201ENST00000529105 249 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 BNIP3P16-201ENST00000589779 534 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AP000787.2-201ENST00000604432 568 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AL591516.1-201ENST00000611326 274 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 AL591424.2-201ENST00000617023 128 ntBASIC4.45□□□□□ -1.7
LTBP3Q9NS15 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
LTBP3Q9NS15 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.428-201ENST00000384078 102 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 Y_RNA.476-201ENST00000384347 108 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 MIR517A-201ENST00000385001 87 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 AL445529.1-201ENST00000398713 389 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 RNU6-985P-201ENST00000410182 104 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 RNU6-1025P-201ENST00000410629 104 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 Z85995.1-201ENST00000415547 335 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 MTCYBP10-201ENST00000424905 650 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 RPL23AP50-201ENST00000434149 455 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 FABP5P15-201ENST00000453566 214 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 BTF3P15-201ENST00000455606 336 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 CEACAMP4-201ENST00000457676 421 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 RNU7-187P-201ENST00000458985 68 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 AC093663.1-201ENST00000497190 394 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 RNA5SP208-201ENST00000516156 78 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.44□□□□□ -1.7
LTBP3Q9NS15 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LTBP3Q9NS15 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms