Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-1-201ENST00000383898 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-42P-201ENST00000384165 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-36P-201ENST00000384172 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-4P-201ENST00000384205 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-5P-201ENST00000384238 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-3P-201ENST00000384314 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-2-201ENST00000384627 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-9-201ENST00000384776 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-33P-201ENST00000384793 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 MIR489-201ENST00000384923 84 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 MIR525-201ENST00000384978 85 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AC245517.4-201ENST00000448601 281 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 MTND2P24-201ENST00000453434 806 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AP003066.2-201ENST00000529375 555 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AL137100.2-201ENST00000555786 315 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 AC079148.1-201ENST00000565944 819 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 MTATP6P3-201ENST00000581686 676 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 RNU6-6P-201ENST00000606623 107 ntBASIC1.08□□□□□ -2.24
CCDC171Q6TFL3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 SNORA25B-201ENST00000365507 128 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 MIR95-201ENST00000385072 81 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AL160275.3-201ENST00000423876 471 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 USP9YP35-201ENST00000435696 412 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 CBX3P8-201ENST00000532412 525 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.07□□□□□ -2.24
CCDC171Q6TFL3 MIR561-201ENST00000385216 97 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AL109755.1-201ENST00000401791 649 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 RNU6-77P-201ENST00000410554 91 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 PSMA6P3-201ENST00000428242 164 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AL354941.1-201ENST00000438600 464 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 CR769776.1-201ENST00000441254 787 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 RPS4XP11-201ENST00000446897 772 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AL590365.1-201ENST00000450788 243 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 SNRPFP3-201ENST00000457792 225 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AC084024.2-201ENST00000503480 791 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 COX7A2P2-201ENST00000505291 250 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AP003497.1-201ENST00000528472 562 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 AL356432.3-201ENST00000568952 465 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 MIR4422-201ENST00000581938 83 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
CCDC171Q6TFL3 MTCO1P23-201ENST00000415223 1526 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 MTCO1P18-201ENST00000455518 1419 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 RNU2-33P-201ENST00000410344 192 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 HMGN1P14-201ENST00000412459 517 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AC108059.3-201ENST00000456388 214 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AC112492.4-201ENST00000456549 352 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 RPS27AP10-201ENST00000496103 208 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 RNU6-416P-201ENST00000516265 103 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 ARL2BPP5-201ENST00000523141 481 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AL132857.1-201ENST00000555180 708 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 FAM71BP1-201ENST00000604431 523 ntBASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
CCDC171Q6TFL3 MTND5P9-201ENST00000503854 1755 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 RNU6-878P-201ENST00000384578 110 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 MIR1283-2-201ENST00000408621 87 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 CYCSP33-201ENST00000414485 327 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 BTF3P8-201ENST00000414577 526 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 AC008850.1-201ENST00000427546 362 ntBASIC1.04□□□□□ -2.24
CCDC171Q6TFL3 MTCO1P53-201ENST00000441633 699 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms