Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AP003072.2-201ENST00000527756 676 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AL391840.1-201ENST00000571144 367 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC073648.5-201ENST00000603502 305 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 MIR98-201ENST00000606724 119 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 HULC.1-201ENST00000612720 240 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 AC068880.5-201ENST00000624331 290 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 MTND1P37-201ENST00000636562 264 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.55□□□□□ -2
RFWD3Q6PCD5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RFWD3Q6PCD5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFWD3Q6PCD5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL049641.1-201ENST00000441055 1948 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFWD3Q6PCD5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC073343.1-201ENST00000328239 651 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 MIR325-201ENST00000385260 98 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 Y_RNA.582-201ENST00000391023 95 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL139413.1-201ENST00000421309 217 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC092047.1-201ENST00000424997 240 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 MED13P1-201ENST00000428342 171 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC133104.1-201ENST00000429100 218 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC007919.1-201ENST00000429380 217 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 DLGAP5P1-201ENST00000430307 464 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 USP9YP14-201ENST00000430663 563 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 MYL8P-204ENST00000431574 518 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL512844.2-201ENST00000433990 593 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 Z82210.1-201ENST00000440037 231 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 PIGFP3-201ENST00000441918 722 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 NEFMP1-201ENST00000443423 1006 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC079448.1-201ENST00000449377 373 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 RNU6-420P-201ENST00000458780 107 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL135752.1-201ENST00000479477 471 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 RNU6-1220P-201ENST00000517126 108 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFWD3Q6PCD5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFWD3Q6PCD5 HMGB1P14-201ENST00000557424 591 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AGGF1P4-201ENST00000568249 801 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 MTND1P15-201ENST00000579262 949 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC091805.2-201ENST00000603848 235 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC007363.1-201ENST00000604736 620 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 NDUFA8P1-201ENST00000605525 367 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL139286.2-201ENST00000606838 396 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 Z99129.1-201ENST00000612510 255 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AC034102.8-201ENST00000615146 484 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL161629.2-201ENST00000615347 275 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AL589994.2-201ENST00000621124 579 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 OR5H6-203ENST00000642105 978 ntBASIC2.54□□□□□ -2
RFWD3Q6PCD5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFWD3Q6PCD5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFWD3Q6PCD5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
RFWD3Q6PCD5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC069528.2-201ENST00000624849 1991 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFWD3Q6PCD5 SMIM11P1-201ENST00000369586 178 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AL359511.1-201ENST00000402970 211 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 MTCO3P41-201ENST00000414801 328 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 HMGB1P27-201ENST00000431429 603 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 BNIP3P2-201ENST00000441221 577 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC126182.1-201ENST00000478134 357 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AL160314.1-201ENST00000490836 438 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC091435.1-201ENST00000505442 584 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 SCARNA24.1-201ENST00000516465 137 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC090572.1-201ENST00000519251 160 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AP003392.2-201ENST00000527269 208 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.53□□□□□ -2
RFWD3Q6PCD5 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
RFWD3Q6PCD5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms