Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RNFT1Q5M7Z0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 RNA5SP87-201ENST00000384155 118 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 SNORA66-201ENST00000384792 133 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 MIR15B-201ENST00000385045 98 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 MIR548A3-201ENST00000385297 97 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-882P-201ENST00000391025 103 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 SNORA75.5-201ENST00000391291 81 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-588P-201ENST00000410281 105 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 FABP5P15-201ENST00000453566 214 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC092798.1-201ENST00000458542 409 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-1007P-201ENST00000516586 107 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC005868.1-201ENST00000536421 331 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC083809.1-201ENST00000615051 472 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 uc_338.18-201ENST00000615451 175 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC004467.1-201ENST00000615678 330 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AL353748.2-201ENST00000622148 471 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 CR381572.2-201ENST00000624852 397 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 AC241585.2-209ENST00000638217 143 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 ZNF702P-202ENST00000434269 1966 ntBASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNFT1Q5M7Z0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RNY1P11-201ENST00000363759 113 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RNVU1-6-201ENST00000364688 164 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.280-201ENST00000364765 112 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 SNORA70.6-201ENST00000383934 134 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.584-201ENST00000391090 114 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AL358075.3-201ENST00000426289 226 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AL353748.1-201ENST00000440753 474 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC010095.1-201ENST00000443543 144 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 IGHV5-78-201ENST00000450948 295 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RPS29P33-201ENST00000456717 146 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RN7SL197P-201ENST00000466981 299 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 RPS29P22-201ENST00000472363 168 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC139453.3-201ENST00000493276 369 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC018448.1-201ENST00000552843 316 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 MIR4660-201ENST00000583549 74 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 MIR7853-201ENST00000584820 132 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC010999.1-201ENST00000611856 324 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AL391261.4-201ENST00000616012 481 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC091932.3-201ENST00000624223 323 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 SCARNA4-202ENST00000625402 129 ntBASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNFT1Q5M7Z0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 Y_RNA.294-201ENST00000364916 102 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-142P-201ENST00000384019 107 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-880P-201ENST00000384526 107 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 MIR888-201ENST00000401186 77 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 MIR1250-201ENST00000408098 113 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 AC112498.1-201ENST00000444401 332 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RN7SL443P-201ENST00000464331 290 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RN7SL319P-201ENST00000480656 221 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-513P-201ENST00000516104 104 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-453P-201ENST00000516819 85 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 AC136628.3-201ENST00000521868 290 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 AC022790.1-201ENST00000522872 204 ntBASIC4.59□□□□□ -1.67
RNFT1Q5M7Z0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms