Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNA5SP404-201ENST00000517118 132 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 COPS8P3-201ENST00000526024 482 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AC079598.5-201ENST00000547460 117 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 BNIP3P27-201ENST00000599991 412 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 AL603758.1-201ENST00000618654 241 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.87□□□□□ -2.27
CCDC58Q4VC31 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC58Q4VC31 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 MIR1262-201ENST00000408276 93 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 RPL21P90-201ENST00000415692 466 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 USP9YP26-201ENST00000421008 661 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 USP9YP18-201ENST00000425912 695 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 USP9YP17-201ENST00000444617 696 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 MOB1AP2-201ENST00000446060 614 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC087343.1-201ENST00000477341 475 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC108729.1-201ENST00000487812 947 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 RPL23AP94-201ENST00000512518 302 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC112198.4-201ENST00000515450 351 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 PSMA3P-201ENST00000555485 635 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AL121821.2-201ENST00000556081 394 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 AC012213.3-201ENST00000577199 777 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 BBIP1P1-201ENST00000602999 279 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 NDUFA8P1-201ENST00000605525 367 ntBASIC0.86□□□□□ -2.27
CCDC58Q4VC31 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
CCDC58Q4VC31 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 SNORD14D-201ENST00000384390 87 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 SNORA48.1-201ENST00000390879 135 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 CCNG1P1-201ENST00000406783 885 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 NANOGP2-201ENST00000435391 727 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AP006587.4-201ENST00000526053 529 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 CENPUP1-201ENST00000526649 1202 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AC002545.1-201ENST00000592511 181 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AC004805.2-201ENST00000605382 482 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AL157834.3-201ENST00000615543 103 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 AL078604.3-201ENST00000615580 211 ntBASIC0.85□□□□□ -2.27
CCDC58Q4VC31 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC58Q4VC31 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 RNU1-58P-201ENST00000362413 163 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 SNORA17.3-201ENST00000391159 129 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 SNORA11.2-201ENST00000408318 127 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AC019178.2-201ENST00000423595 505 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AL929288.2-201ENST00000446368 407 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AL441985.1-201ENST00000457727 251 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AL160314.1-201ENST00000490836 438 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 ADAM3B-201ENST00000569937 840 ntBASIC0.84□□□□□ -2.27
CCDC58Q4VC31 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC58Q4VC31 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
CCDC58Q4VC31 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.84□□□□□ -2.28
CCDC58Q4VC31 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 MIR302D-201ENST00000362275 68 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 RPL22P22-201ENST00000395439 379 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC010095.1-201ENST00000443543 144 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC002381.1-201ENST00000447049 280 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 USP9YP34-201ENST00000453983 808 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 MEMO1P3-201ENST00000459811 302 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 RNU6-840P-201ENST00000517275 65 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC087441.2-201ENST00000529141 262 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AL022345.1-201ENST00000607292 135 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AL391813.2-201ENST00000609113 322 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 MIR6078-201ENST00000611069 100 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC073569.3-201ENST00000619055 682 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 AC092125.1-201ENST00000562568 1995 ntBASIC0.83□□□□□ -2.28
CCDC58Q4VC31 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.83□□□□□ -2.28
CCDC58Q4VC31 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC58Q4VC31 RNU5E-8P-201ENST00000363502 116 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms