Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RPL23P2-201ENST00000320371 421 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 Y_RNA.101-201ENST00000363154 102 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 SNORD32A-201ENST00000364805 84 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 U3.19-201ENST00000390893 196 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 OR2AM1P-201ENST00000422137 422 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 BX323845.1-201ENST00000432417 179 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 RNU6-625P-201ENST00000459412 107 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 SNRPGP7-201ENST00000469016 106 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 RNU4-60P-201ENST00000517239 135 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF144AP50876 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF144AP50876 MIR4431-201ENST00000579990 94 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 DEFB117-201ENST00000602356 141 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 AC126915.2-201ENST00000610957 190 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 SNORA43.4-201ENST00000629559 138 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 BMS1P21-201ENST00000634565 365 ntBASIC4.73□□□□□ -1.65
RNF144AP50876 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF144AP50876 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF144AP50876 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RNF144AP50876 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF144AP50876 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF144AP50876 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 AL139811.1-201ENST00000424779 2299 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF144AP50876 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF144AP50876 CUL1P1-201ENST00000509510 2425 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF144AP50876 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 RNU6-834P-201ENST00000362367 110 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 Y_RNA.43-201ENST00000362670 111 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 Y_RNA.498-201ENST00000384460 102 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF144AP50876 RPL27AP8-201ENST00000424277 446 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 TBCAP1-201ENST00000436520 327 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 GPM6BP3-201ENST00000442797 145 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AC074290.1-201ENST00000448883 135 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF144AP50876 PDCD5P2-201ENST00000507570 312 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF144AP50876 RNU6-155P-201ENST00000516347 100 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 BNIP3P1-201ENST00000547295 580 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 MIR3691-201ENST00000578066 90 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AC053481.4-201ENST00000583164 216 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF144AP50876 DNAJC19P2-201ENST00000593340 302 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AL356157.2-201ENST00000605122 111 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AP005432.2-201ENST00000608162 586 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 AC004467.1-201ENST00000615678 330 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF144AP50876 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF144AP50876 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF144AP50876 AL672167.1-204ENST00000641875 3017 ntBASIC4.72□□□□□ -1.65
RNF144AP50876 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF144AP50876 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF144AP50876 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF144AP50876 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF144AP50876 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
RNF144AP50876 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF144AP50876 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RNF144AP50876 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF144AP50876 C4BPAP1-201ENST00000415474 1893 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 AC004925.1-201ENST00000624256 2706 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RNA5SP183-201ENST00000362452 119 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RNU6-873P-201ENST00000363833 107 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 SNORD115-8-201ENST00000363856 82 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 SNORD115-38-201ENST00000365037 82 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RNU6-1056P-201ENST00000383996 107 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF144AP50876 MIR1290-201ENST00000408735 78 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RPL23AP95-201ENST00000426806 265 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RPL35AP21-201ENST00000437667 333 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF144AP50876 AL121594.1-201ENST00000475906 575 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RN7SL222P-201ENST00000476452 299 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 AC022616.8-201ENST00000533569 253 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF144AP50876 AC018448.1-201ENST00000552843 316 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 MED28P6-201ENST00000558776 231 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 RN7SL435P-201ENST00000584418 282 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF144AP50876 AC090132.2-201ENST00000615881 347 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF144AP50876 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF144AP50876 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF144AP50876 SRP72P2-201ENST00000344851 1979 ntBASIC4.71□□□□□ -1.66
RNF144AP50876 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF144AP50876 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms