Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 Z82243.1-201ENST00000609432 473 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 DISC2.1-201ENST00000612827 205 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 uc_338.34-201ENST00000617467 174 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 SNORA50A-202ENST00000629536 136 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
TM4SF4P48230 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF4P48230 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF4P48230 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AL139276.1-201ENST00000311910 1001 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 MIR412-201ENST00000362142 91 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 RNU1-105P-201ENST00000363470 161 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 SNORA14A-201ENST00000364773 135 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 RNU6-1179P-201ENST00000384667 107 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 HMGN2P8-201ENST00000391458 268 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF4P48230 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF4P48230 AL078601.1-201ENST00000444542 271 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AL118520.1-201ENST00000450770 291 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 HMGB3P22-202ENST00000451823 572 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF4P48230 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.61□□□□□ -1.83
TM4SF4P48230 BTF3L4P4-201ENST00000506381 449 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AC079140.5-201ENST00000507882 310 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF4P48230 AC008716.1-201ENST00000511084 513 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 SNORD60.2-201ENST00000516883 86 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 SNORA31.19-201ENST00000517079 126 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 MTND1P5-201ENST00000517906 940 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AC025755.1-201ENST00000521306 278 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF4P48230 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 AK6P1-201ENST00000540219 478 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.61□□□□□ -1.83
TM4SF4P48230 MTND4LP5-201ENST00000605152 292 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 uc_338.25-201ENST00000613756 156 ntBASIC3.61□□□□□ -1.83
TM4SF4P48230 FER-210ENST00000628534 558 ntTSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF4P48230 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF4P48230 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.61□□□□□ -1.83
TM4SF4P48230 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF4P48230 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF4P48230 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF4P48230 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RNU6-434P-201ENST00000384376 107 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 MIR93-201ENST00000385024 80 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RPL21P90-201ENST00000415692 466 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.6□□□□□ -1.83
TM4SF4P48230 BRK1P2-201ENST00000442875 223 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 RPL23AP11-201ENST00000475260 469 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 TRBV12-1-201ENST00000479785 344 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC139453.3-201ENST00000493276 369 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 HIGD1AP13-201ENST00000509878 289 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RNU1-41P-201ENST00000516161 162 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RNA5SP154-201ENST00000516193 111 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RNU1-48P-201ENST00000516400 162 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF4P48230 AP005435.4-201ENST00000529514 284 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC138761.3-201ENST00000579993 334 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 AC099778.2-201ENST00000610904 211 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC103988.1-201ENST00000566382 2177 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 AC010680.1-201ENST00000590024 3590 ntBASIC3.6□□□□□ -1.83
TM4SF4P48230 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.6□□□□□ -1.83
TM4SF4P48230 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
TM4SF4P48230 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF4P48230 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF4P48230 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.59□□□□□ -1.83
TM4SF4P48230 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF4P48230 OR56A5-201ENST00000340110 738 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 RNU6-1090P-201ENST00000364065 94 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 RHOT1P2-201ENST00000366423 333 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 RNU6-393P-201ENST00000384475 107 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 MIR767-201ENST00000390228 109 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.59□□□□□ -1.83
TM4SF4P48230 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF4P48230 AL356057.2-201ENST00000403318 432 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 AL592114.1-201ENST00000403842 483 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 MIR1277-201ENST00000408536 78 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 RNU6-193P-201ENST00000410977 107 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 RNA5SP508-201ENST00000411327 119 ntBASIC3.59□□□□□ -1.83
TM4SF4P48230 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms