Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RNU6-790P-201ENST00000384479 105 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RPL21P1-201ENST00000399532 476 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RNA5SP129-201ENST00000410276 118 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RNU6-1025P-201ENST00000410629 104 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RN7SKP106-201ENST00000410832 272 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AL158156.1-201ENST00000422509 473 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RPL7P2-201ENST00000427639 268 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RPS15AP10-201ENST00000432472 382 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF4O95104 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF4O95104 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.56□□□□□ -1.84
SCAF4O95104 RN7SL354P-201ENST00000469282 294 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.56□□□□□ -1.84
SCAF4O95104 AC114801.2-201ENST00000503825 781 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF4O95104 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF4O95104 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF4O95104 AC007991.1-201ENST00000522680 631 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCAF4O95104 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF4O95104 AL360157.1-201ENST00000565962 87 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 MIR4697-201ENST00000582977 78 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AL158827.2-201ENST00000602494 330 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AC011373.1-201ENST00000607270 237 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AC100812.1-201ENST00000607622 580 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 U2.1-201ENST00000618978 145 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF4O95104 AL691447.3-201ENST00000635020 330 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.56□□□□□ -1.84
SCAF4O95104 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF4O95104 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCAF4O95104 ZNF72P-201ENST00000425869 1908 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
SCAF4O95104 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAF4O95104 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF4O95104 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
SCAF4O95104 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF4O95104 RNY1P16-201ENST00000363063 111 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 RNU6-173P-201ENST00000364215 104 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 RN7SKP227-201ENST00000364445 330 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 U8.8-201ENST00000365399 135 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 SNORD14.1-201ENST00000365609 90 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 Y_RNA.424-201ENST00000384063 103 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 RNU6-472P-201ENST00000384299 107 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 RNU6-1026P-201ENST00000384465 108 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SCAF4O95104 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SCAF4O95104 RNA5SP332-201ENST00000391063 115 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AL096701.2-201ENST00000416920 238 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAF4O95104 PCNPP5-201ENST00000452246 481 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAF4O95104 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AC006517.1-201ENST00000480485 328 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SCAF4O95104 MLLT10P2-201ENST00000506434 249 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.55□□□□□ -1.84
SCAF4O95104 SCARNA15.2-201ENST00000516409 127 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 SNORA40.14-201ENST00000516543 86 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 RNU6-143P-201ENST00000516942 93 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 Y_RNA.715-201ENST00000517082 110 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.55□□□□□ -1.84
SCAF4O95104 MED28P6-201ENST00000558776 231 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAF4O95104 AC062037.2-201ENST00000610137 73 ntBASIC3.55□□□□□ -1.84
SCAF4O95104 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAF4O95104 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF4O95104 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCAF4O95104 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF4O95104 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF4O95104 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
SCAF4O95104 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAF4O95104 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF4O95104 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF4O95104 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.54□□□□□ -1.84
SCAF4O95104 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
SCAF4O95104 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF4O95104 AL513475.1-201ENST00000406602 315 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 AC009310.1-201ENST00000414414 451 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 USP9YP16-201ENST00000430287 407 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 AC092573.2-201ENST00000434546 243 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 DYNLT3P2-201ENST00000442517 295 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 USP9YP23-201ENST00000455085 407 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 RPS20P22-201ENST00000473700 357 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 RPL12P20-201ENST00000475538 479 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 AC025554.1-201ENST00000505641 188 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 ACA59.1-201ENST00000515966 143 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 RN7SKP289-201ENST00000517244 295 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.54□□□□□ -1.84
SCAF4O95104 AC040926.1-201ENST00000530195 238 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.54□□□□□ -1.84
SCAF4O95104 AC004024.1-201ENST00000549244 247 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.54□□□□□ -1.84
SCAF4O95104 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.54□□□□□ -1.84
SCAF4O95104 AC016727.2-201ENST00000603988 621 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 AC090132.2-201ENST00000615881 347 ntBASIC3.54□□□□□ -1.84
SCAF4O95104 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.54□□□□□ -1.84
SCAF4O95104 MIR8062-201ENST00000621515 85 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms