Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.85□□□□□ -1.79
CDKL5O76039 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDKL5O76039 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDKL5O76039 Z83843.1-201ENST00000604070 3685 ntBASIC3.85□□□□□ -1.79
CDKL5O76039 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDKL5O76039 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDKL5O76039 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDKL5O76039 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.84□□□□□ -1.79
CDKL5O76039 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDKL5O76039 RNU6-1249P-201ENST00000363237 111 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 Y_RNA.212-201ENST00000364177 102 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 Y_RNA.395-201ENST00000383945 109 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 MIR449B-201ENST00000384995 97 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDKL5O76039 RNU6-308P-201ENST00000390957 107 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CDKL5O76039 RNU6-712P-201ENST00000410558 100 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDKL5O76039 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 CALM2P2-201ENST00000428512 440 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 CKS1BP5-201ENST00000434172 273 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 RPL23AP33-201ENST00000442301 452 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 RPL32P28-201ENST00000443577 397 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 FABP5P13-201ENST00000452144 328 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDKL5O76039 HIGD1AP13-201ENST00000509878 289 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.84□□□□□ -1.79
CDKL5O76039 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 IMMP1LP2-201ENST00000552954 492 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.84□□□□□ -1.79
CDKL5O76039 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.84□□□□□ -1.79
CDKL5O76039 AC138761.3-201ENST00000579993 334 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AC016925.2-201ENST00000605108 242 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AL670379.4-201ENST00000605279 254 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 AC007619.2-201ENST00000605743 379 ntBASIC3.84□□□□□ -1.79
CDKL5O76039 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.84□□□□□ -1.79
CDKL5O76039 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
CDKL5O76039 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDKL5O76039 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL5O76039 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL5O76039 SNORA31-201ENST00000362607 130 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 RNU6-1188P-201ENST00000363795 107 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 SNORA23-201ENST00000365128 182 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 SNORA22B-201ENST00000383876 138 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 Y_RNA.422-201ENST00000384054 114 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 SNORA16.2-201ENST00000390991 127 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AL139396.1-201ENST00000421137 167 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 FABP5P14-201ENST00000437273 393 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC004866.2-201ENST00000438285 481 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 RPL29P29-201ENST00000448725 423 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 MTND1P17-201ENST00000448961 204 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 RPL21P129-201ENST00000491732 478 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.83□□□□□ -1.8
CDKL5O76039 AP002812.1-201ENST00000495378 474 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 RPS27P27-201ENST00000498779 255 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 TBCAP3-201ENST00000512475 312 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 RNU6-390P-201ENST00000516259 103 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 SNORA67.7-201ENST00000516664 135 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.83□□□□□ -1.8
CDKL5O76039 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL5O76039 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC090115.3-201ENST00000553218 849 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 TRAV37-201ENST00000553906 342 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC007151.1-201ENST00000572774 483 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL5O76039 AL158032.1-201ENST00000605401 106 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC073657.2-201ENST00000605661 303 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL5O76039 AC019193.3-201ENST00000609144 554 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC009570.1-201ENST00000609599 745 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 FAM157A-202ENST00000615155 405 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC006133.1-201ENST00000617106 264 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL5O76039 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 AC007256.1-201ENST00000392253 2765 ntBASIC3.83□□□□□ -1.8
CDKL5O76039 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDKL5O76039 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL5O76039 RNU1-70P-201ENST00000362618 164 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 Y_RNA.135-201ENST00000363439 95 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 Y_RNA.146-201ENST00000363549 102 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 Y_RNA.187-201ENST00000363918 113 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 Y_RNA.197-201ENST00000364004 102 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 RNU1-33P-201ENST00000364249 162 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 MIR153-1-201ENST00000384914 90 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 SNORD70.1-201ENST00000391007 85 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AC110754.1-201ENST00000399740 601 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL5O76039 AP000567.1-201ENST00000406413 156 ntBASIC3.82□□□□□ -1.8
CDKL5O76039 AC092809.3-201ENST00000415453 231 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms