Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-339P-201ENST00000384310 107 ntBASIC0.97□□□□□ -2.25
CHD1O14646 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
CHD1O14646 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.97□□□□□ -2.25
CHD1O14646 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.97□□□□□ -2.25
CHD1O14646 AC113398.2-201ENST00000507630 558 ntBASIC0.97□□□□□ -2.25
CHD1O14646 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.97□□□□□ -2.25
CHD1O14646 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.97□□□□□ -2.25
CHD1O14646 CYP4A27P-201ENST00000567218 190 ntBASIC0.97□□□□□ -2.25
CHD1O14646 AC074051.3-201ENST00000570238 358 ntBASIC0.97□□□□□ -2.25
CHD1O14646 FRG1HP-204ENST00000617940 757 ntBASIC0.97□□□□□ -2.25
CHD1O14646 AL627230.5-201ENST00000619807 58 ntBASIC0.97□□□□□ -2.25
CHD1O14646 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHD1O14646 RNU6-98P-201ENST00000384173 107 ntBASIC0.96□□□□□ -2.26
CHD1O14646 Y_RNA.518-201ENST00000384552 113 ntBASIC0.96□□□□□ -2.26
CHD1O14646 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHD1O14646 NDUFS5P1-201ENST00000405668 289 ntBASIC0.96□□□□□ -2.26
CHD1O14646 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.96□□□□□ -2.26
CHD1O14646 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CHD1O14646 RNU6-989P-201ENST00000362756 107 ntBASIC0.95□□□□□ -2.26
CHD1O14646 RNU6-730P-201ENST00000383954 104 ntBASIC0.95□□□□□ -2.26
CHD1O14646 HMGN2P39-201ENST00000398005 273 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC023141.4-201ENST00000412031 328 ntBASIC0.95□□□□□ -2.26
CHD1O14646 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC004854.1-201ENST00000440356 349 ntBASIC0.95□□□□□ -2.26
CHD1O14646 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD1O14646 MIR892C-201ENST00000516410 77 ntBASIC0.95□□□□□ -2.26
CHD1O14646 RNU6-798P-201ENST00000516912 103 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC067904.2-201ENST00000517322 1283 ntBASIC0.95□□□□□ -2.26
CHD1O14646 HAUS1P3-201ENST00000523909 662 ntBASIC0.95□□□□□ -2.26
CHD1O14646 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.95□□□□□ -2.26
CHD1O14646 AC007151.1-201ENST00000572774 483 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD1O14646 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AL137246.1-201ENST00000607072 977 ntBASIC0.95□□□□□ -2.26
CHD1O14646 U4atac.1-201ENST00000618345 95 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AL136313.1-201ENST00000624804 202 ntBASIC0.95□□□□□ -2.26
CHD1O14646 RNU6-270P-201ENST00000364131 105 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC093106.2-201ENST00000428212 385 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.95□□□□□ -2.26
CHD1O14646 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.95□□□□□ -2.26
CHD1O14646 AL355802.3-201ENST00000607571 545 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC069294.1-201ENST00000608397 350 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AC090116.1-201ENST00000615679 446 ntBASIC0.95□□□□□ -2.26
CHD1O14646 AP003485.1-201ENST00000625093 753 ntBASIC0.95□□□□□ -2.26
CHD1O14646 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHD1O14646 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHD1O14646 Y_RNA.60-201ENST00000362831 98 ntBASIC0.94□□□□□ -2.26
CHD1O14646 RNU6-1164P-201ENST00000364428 107 ntBASIC0.94□□□□□ -2.26
CHD1O14646 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.94□□□□□ -2.26
CHD1O14646 AL356421.1-201ENST00000403255 413 ntBASIC0.94□□□□□ -2.26
CHD1O14646 U6atac.2-201ENST00000408644 118 ntBASIC0.94□□□□□ -2.26
CHD1O14646 RNU6-233P-201ENST00000410845 141 ntBASIC0.94□□□□□ -2.26
CHD1O14646 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.94□□□□□ -2.26
CHD1O14646 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.94□□□□□ -2.26
CHD1O14646 HMGB1P35-201ENST00000503360 598 ntBASIC0.94□□□□□ -2.26
CHD1O14646 AL021997.1-201ENST00000605757 193 ntBASIC0.94□□□□□ -2.26
CHD1O14646 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.94□□□□□ -2.26
CHD1O14646 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.93□□□□□ -2.26
CHD1O14646 PTENP1-201ENST00000447117 1215 ntBASIC0.93□□□□□ -2.26
CHD1O14646 HMGN2P9-201ENST00000476875 229 ntBASIC0.93□□□□□ -2.26
CHD1O14646 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.93□□□□□ -2.26
CHD1O14646 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
CHD1O14646 AC022616.2-201ENST00000523185 300 ntBASIC0.93□□□□□ -2.26
CHD1O14646 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.93□□□□□ -2.26
CHD1O14646 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.93□□□□□ -2.26
CHD1O14646 BX322635.1-201ENST00000605804 496 ntBASIC0.93□□□□□ -2.26
CHD1O14646 AC099842.1-201ENST00000619919 596 ntBASIC0.93□□□□□ -2.26
CHD1O14646 AC024595.1-201ENST00000623088 387 ntBASIC0.93□□□□□ -2.26
CHD1O14646 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CHD1O14646 MTND5P15-201ENST00000434246 349 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AL590365.1-201ENST00000450788 243 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.92□□□□□ -2.26
CHD1O14646 SNORA62.5-201ENST00000516634 120 ntBASIC0.92□□□□□ -2.26
CHD1O14646 RNA5SP165-201ENST00000517142 115 ntBASIC0.92□□□□□ -2.26
CHD1O14646 C1DP5-201ENST00000525775 383 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
CHD1O14646 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.92□□□□□ -2.26
CHD1O14646 AC010620.1-201ENST00000601088 1102 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC010738.1-201ENST00000604970 987 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC110792.4-201ENST00000609843 298 ntBASIC0.92□□□□□ -2.26
CHD1O14646 DUSP12P1-201ENST00000612874 516 ntBASIC0.92□□□□□ -2.26
CHD1O14646 Y_RNA.390-201ENST00000383932 102 ntBASIC0.92□□□□□ -2.26
CHD1O14646 TAF9BP2-201ENST00000400856 499 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.92□□□□□ -2.26
CHD1O14646 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CHD1O14646 GTF2IP20-201ENST00000431663 360 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.92□□□□□ -2.26
CHD1O14646 MTND6P13-201ENST00000443510 523 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC103851.1-201ENST00000506833 274 ntBASIC0.92□□□□□ -2.26
CHD1O14646 RNA5SP112-201ENST00000515937 99 ntBASIC0.92□□□□□ -2.26
CHD1O14646 RNU6-1095P-201ENST00000516148 108 ntBASIC0.92□□□□□ -2.26
CHD1O14646 RNA5SP137-201ENST00000516833 135 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.92□□□□□ -2.26
CHD1O14646 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.92□□□□□ -2.26
CHD1O14646 AC012669.1-201ENST00000603209 283 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AC135803.1-201ENST00000608748 565 ntBASIC0.92□□□□□ -2.26
CHD1O14646 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.92□□□□□ -2.26
CHD1O14646 MTND5P11-201ENST00000511037 1812 ntBASIC0.91□□□□□ -2.26
CHD1O14646 RNU6-1155P-201ENST00000363554 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms