Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX4O14627 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 AC020550.1-201ENST00000447385 163 ntBASIC2.45□□□□□ -2.02
CDX4O14627 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 AC013267.1-201ENST00000458227 267 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 AC234781.5-201ENST00000508429 271 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC091133.4-201ENST00000511142 308 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX4O14627 Y_RNA.672-201ENST00000516289 104 ntBASIC2.45□□□□□ -2.02
CDX4O14627 RNU2-10P-201ENST00000516375 211 ntBASIC2.45□□□□□ -2.02
CDX4O14627 RNU6-314P-201ENST00000516574 104 ntBASIC2.45□□□□□ -2.02
CDX4O14627 MTCO2P4-201ENST00000517968 247 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC245166.1-201ENST00000521012 253 ntBASIC2.45□□□□□ -2.02
CDX4O14627 CASP1P1-201ENST00000526345 212 ntBASIC2.45□□□□□ -2.02
CDX4O14627 RANP3-201ENST00000530970 276 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX4O14627 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.45□□□□□ -2.02
CDX4O14627 TRAV28-201ENST00000557548 323 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX4O14627 MIR3118-1-201ENST00000581787 76 ntBASIC2.45□□□□□ -2.02
CDX4O14627 MIR4506-201ENST00000584693 77 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.6-201ENST00000603753 252 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.11-201ENST00000604059 253 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC008162.1-201ENST00000604718 254 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.1-201ENST00000604752 252 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.5-201ENST00000605253 252 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.12-201ENST00000605291 253 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.8-201ENST00000605353 252 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL670379.7-201ENST00000605823 252 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 AC072046.2-201ENST00000618366 268 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL158209.2-201ENST00000619266 216 ntBASIC2.45□□□□□ -2.02
CDX4O14627 AL136313.1-201ENST00000624804 202 ntBASIC2.45□□□□□ -2.02
CDX4O14627 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX4O14627 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CDX4O14627 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CDX4O14627 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDX4O14627 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
CDX4O14627 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX4O14627 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX4O14627 Y_RNA.554-201ENST00000384672 102 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RNU2-33P-201ENST00000410344 192 ntBASIC2.44□□□□□ -2.02
CDX4O14627 Z85995.1-201ENST00000415547 335 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX4O14627 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX4O14627 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 RPL31P35-201ENST00000431058 377 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX4O14627 AC104850.1-201ENST00000435940 476 ntBASIC2.44□□□□□ -2.02
CDX4O14627 ARPC3P1-201ENST00000437218 533 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL451074.3-201ENST00000437709 472 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RPS29P6-201ENST00000438196 145 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RPL7P12-201ENST00000446719 750 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 AC079448.1-201ENST00000449377 373 ntBASIC2.44□□□□□ -2.02
CDX4O14627 MTCO2P29-201ENST00000465212 189 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RN7SL283P-201ENST00000489055 303 ntBASIC2.44□□□□□ -2.02
CDX4O14627 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX4O14627 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CDX4O14627 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 TTC39CP1-201ENST00000512513 755 ntBASIC2.44□□□□□ -2.02
CDX4O14627 RNU6-927P-201ENST00000516199 100 ntBASIC2.44□□□□□ -2.02
CDX4O14627 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX4O14627 AC068657.1-201ENST00000520807 306 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AC107934.1-201ENST00000522215 217 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AC128657.1-201ENST00000549459 145 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX4O14627 AC136619.2-201ENST00000563361 631 ntBASIC2.44□□□□□ -2.02
CDX4O14627 TPRKBP2-201ENST00000565969 475 ntBASIC2.44□□□□□ -2.02
CDX4O14627 MIR4293-201ENST00000584305 78 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL022154.1-201ENST00000604698 785 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AC068944.2-201ENST00000610373 403 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX4O14627 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX4O14627 U6atac.1-201ENST00000616025 117 ntBASIC2.44□□□□□ -2.02
CDX4O14627 AC091953.2-201ENST00000623979 160 ntBASIC2.44□□□□□ -2.02
CDX4O14627 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX4O14627 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX4O14627 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 RPL9P7-201ENST00000330965 580 ntBASIC2.43□□□□□ -2.02
CDX4O14627 RNY4P16-201ENST00000364768 94 ntBASIC2.43□□□□□ -2.02
CDX4O14627 Y_RNA.296-201ENST00000364930 108 ntBASIC2.43□□□□□ -2.02
CDX4O14627 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDX4O14627 AC127391.1-201ENST00000411737 98 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AL451074.5-201ENST00000415894 435 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX4O14627 RPS15AP12-201ENST00000419498 388 ntBASIC2.43□□□□□ -2.02
CDX4O14627 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX4O14627 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX4O14627 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms